Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U7B entry

There are 3 chains in PDB entry 6U7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 321
B
 SER -3VAL 172
C
 SER 2GLU 150
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6U7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
22 47Right-handed alpha
Helix 3
AA3
A
59 64Right-handed alpha
Helix 4
AA4
A
87 103Right-handed alpha
Helix 5
AA5
A
107 109Right-handed 310
Helix 6
AA6
A
139 143Right-handed 310
Helix 7
AA7
A
158 173Right-handed alpha
Helix 8
AA8
A
175 195Right-handed alpha
Helix 9
AA9
A
201 215Right-handed alpha
Helix 10
AB1
A
221 237Right-handed alpha
Helix 11
AB2
A
249 254Right-handed 310
Helix 12
AB3
A
271 276Right-handed 310
Helix 13
AB4
A
277 301Right-handed alpha
Helix 14
AB5
A
303 316Right-handed alpha
Helix 15
AB6
B
4 7Right-handed 310
Helix 16
AB7
B
15 38Right-handed alpha
Helix 17
AB8
B
41 59Right-handed alpha
Helix 18
AB9
B
116 122Right-handed alpha
Helix 19
AC1
B
123 131Right-handed alpha
Helix 20
AC2
C
7 19Right-handed alpha
Helix 21
AC3
C
22 47Right-handed alpha
Helix 22
AC4
C
59 64Right-handed alpha
Helix 23
AC5
C
87 103Right-handed alpha
Helix 24
AC6
C
107 109Right-handed 310
Helix 25
AC7
C
139 143Right-handed 310
Helix 26
AC8
C
158 173Right-handed alpha
Helix 27
AC9
C
175 195Right-handed alpha
Helix 28
AD1
C
201 215Right-handed alpha
Helix 29
AD2
C
221 237Right-handed alpha
Helix 30
AD3
C
249 253Right-handed 310
Helix 31
AD4
C
277 301Right-handed alpha
Helix 32
AD5
C
303 316Right-handed alpha
Helix 33
AD6
D
15 38Right-handed alpha
Helix 34
AD7
D
41 58Right-handed alpha
Helix 35
AD8
D
116 122Right-handed alpha
Helix 36
AD9
D
123 131Right-handed alpha
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There are 6 sheets in PDB entry 6U7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
72 79anti-parallel
Strand 3
A
128 135parallel
Strand 4
A
118 120anti-parallel
Strand 5
A
111 113anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
155 157anti-parallel
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There are 14 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 141first strand
Strand 2
D
-1 2parallel
Strand 3
B
108 115parallel
Strand 4
B
61 70anti-parallel
Strand 5
B
73 85anti-parallel
Strand 6
B
161 169anti-parallel
Strand 7
B
149 158anti-parallel
Strand 8
D
149 158anti-parallel
Strand 9
D
161 169anti-parallel
Strand 10
D
73 85anti-parallel
Strand 11
D
61 70anti-parallel
Strand 12
D
108 115anti-parallel
Strand 13
B
-1 2parallel
Strand 14
D
139 141parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
73 85parallel
Strand 3
B
161 169anti-parallel
Strand 4
B
149 158anti-parallel
Strand 5
D
149 158anti-parallel
Strand 6
D
161 169anti-parallel
Strand 7
D
73 85anti-parallel
Strand 8
D
145 146parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 57first strand
Strand 2
C
72 79anti-parallel
Strand 3
C
128 135parallel
Strand 4
C
118 120anti-parallel
Strand 5
C
111 113anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 57first strand
Strand 2
C
72 79anti-parallel
Strand 3
C
128 135parallel
Strand 4
C
144 147anti-parallel
Strand 5
C
154 157anti-parallel
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