Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U7K entry

There are 3 chains in PDB entry 6U7K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 43	TYR 1242
B	ALA 43	TYR 1242
C	ALA 43	TYR 1242

There are 68 helices in PDB entry 6U7K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	231	235	Right-handed 310
Helix 2	AA2	A	242	246	Right-handed 310
Helix 3	AA3	A	322	326	Right-handed 310
Helix 4	AA4	A	463	470	Right-handed alpha
Helix 5	AA5	A	572	577	Right-handed alpha
Helix 6	AA6	A	804	811	Right-handed alpha
Helix 7	AA7	A	813	821	Right-handed alpha
Helix 8	AA8	A	827	849	Right-handed alpha
Helix 9	AA9	A	852	860	Right-handed alpha
Helix 10	AB1	A	871	876	Right-handed alpha
Helix 11	AB2	A	892	903	Right-handed alpha
Helix 12	AB3	A	925	933	Right-handed alpha
Helix 13	AB4	A	943	957	Right-handed alpha
Helix 14	AB5	A	970	981	Right-handed alpha
Helix 15	AB6	A	993	1011	Right-handed alpha
Helix 16	AB7	A	1014	1018	Right-handed 310
Helix 17	AB8	A	1019	1024	Right-handed 310
Helix 18	AB9	A	1027	1040	Right-handed alpha
Helix 19	AC1	A	1043	1052	Right-handed alpha
Helix 20	AC2	A	1053	1055	Right-handed 310
Helix 21	AC3	A	1063	1068	Right-handed alpha
Helix 22	AC4	A	1072	1120	Right-handed alpha
Helix 23	AC5	A	1234	1239	Right-handed alpha
Helix 24	AC6	B	230	235	Right-handed 310
Helix 25	AC7	B	242	246	Right-handed 310
Helix 26	AC8	B	322	326	Right-handed 310
Helix 27	AC9	B	463	473	Right-handed alpha
Helix 28	AD1	B	572	577	Right-handed alpha
Helix 29	AD2	B	804	811	Right-handed alpha
Helix 30	AD3	B	813	821	Right-handed alpha
Helix 31	AD4	B	827	847	Right-handed alpha
Helix 32	AD5	B	852	860	Right-handed alpha
Helix 33	AD6	B	871	876	Right-handed alpha
Helix 34	AD7	B	892	904	Right-handed alpha
Helix 35	AD8	B	914	919	Right-handed alpha
Helix 36	AD9	B	925	933	Right-handed alpha
Helix 37	AE1	B	943	957	Right-handed alpha
Helix 38	AE2	B	970	981	Right-handed alpha
Helix 39	AE3	B	991	1009	Right-handed alpha
Helix 40	AE4	B	1014	1018	Right-handed 310
Helix 41	AE5	B	1019	1024	Right-handed 310
Helix 42	AE6	B	1027	1041	Right-handed alpha
Helix 43	AE7	B	1043	1052	Right-handed alpha
Helix 44	AE8	B	1063	1070	Right-handed alpha
Helix 45	AE9	B	1072	1120	Right-handed alpha
Helix 46	AF1	B	1234	1239	Right-handed alpha
Helix 47	AF2	C	322	326	Right-handed 310
Helix 48	AF3	C	463	472	Right-handed alpha
Helix 49	AF4	C	572	577	Right-handed alpha
Helix 50	AF5	C	804	811	Right-handed alpha
Helix 51	AF6	C	813	821	Right-handed alpha
Helix 52	AF7	C	825	849	Right-handed alpha
Helix 53	AF8	C	852	860	Right-handed alpha
Helix 54	AF9	C	871	876	Right-handed alpha
Helix 55	AG1	C	892	901	Right-handed alpha
Helix 56	AG2	C	913	918	Right-handed 310
Helix 57	AG3	C	925	933	Right-handed alpha
Helix 58	AG4	C	943	956	Right-handed alpha
Helix 59	AG5	C	957	960	Right-handed 310
Helix 60	AG6	C	970	981	Right-handed alpha
Helix 61	AG7	C	991	1009	Right-handed alpha
Helix 62	AG8	C	1014	1018	Right-handed 310
Helix 63	AG9	C	1019	1024	Right-handed 310
Helix 64	AH1	C	1027	1042	Right-handed alpha
Helix 65	AH2	C	1043	1052	Right-handed alpha
Helix 66	AH3	C	1063	1069	Right-handed alpha
Helix 67	AH4	C	1072	1119	Right-handed alpha
Helix 68	AH5	C	1234	1239	Right-handed alpha

There are 43 sheets in PDB entry 6U7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	51	first strand
Strand 2	A	208	213	anti-parallel
Strand 3	A	223	227	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	181	first strand
Strand 2	A	169	173	anti-parallel
Strand 3	A	162	166	anti-parallel
Strand 4	A	75	77	anti-parallel
Strand 5	A	202	204	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	285	first strand
Strand 2	A	435	451	anti-parallel
Strand 3	A	315	319	anti-parallel
Strand 4	A	394	398	anti-parallel
Strand 5	A	403	405	anti-parallel
Strand 6	A	408	411	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	285	first strand
Strand 2	A	435	451	anti-parallel
Strand 3	A	454	460	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	295	first strand
Strand 2	A	416	422	anti-parallel
Strand 3	A	332	336	anti-parallel
Strand 4	A	341	347	anti-parallel
Strand 5	A	368	376	anti-parallel
Strand 6	A	379	388	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	480	485	first strand
Strand 2	A	700	706	anti-parallel
Strand 3	A	709	715	anti-parallel
Strand 4	A	732	735	anti-parallel
Strand 5	A	724	727	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	499	first strand
Strand 2	A	647	651	parallel
Strand 3	A	654	663	anti-parallel
Strand 4	A	691	695	anti-parallel
Strand 5	A	680	684	anti-parallel
Strand 6	A	672	674	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	533	first strand
Strand 2	A	507	519	anti-parallel
Strand 3	A	545	554	parallel
Strand 4	A	610	627	parallel
Strand 5	A	581	588	anti-parallel
Strand 6	A	538	540	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	533	first strand
Strand 2	A	507	519	anti-parallel
Strand 3	A	545	554	parallel
Strand 4	A	610	627	parallel
Strand 5	A	596	603	anti-parallel
Strand 6	A	562	567	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	744	748	first strand
Strand 2	A	751	754	anti-parallel
Strand 3	A	759	761	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	782	first strand
Strand 2	A	1160	1165	anti-parallel
Strand 3	A	1184	1188	anti-parallel
Strand 4	A	1200	1203	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	795	first strand
Strand 2	A	1147	1157	anti-parallel
Strand 3	A	1135	1144	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	801	803	first strand
Strand 2	A	935	937	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1217	1220	first strand
Strand 2	A	1175	1179	anti-parallel
Strand 3	A	1169	1171	anti-parallel
Strand 4	A	1228	1230	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	209	213	anti-parallel
Strand 3	B	224	227	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	181	first strand
Strand 2	B	169	173	anti-parallel
Strand 3	B	162	166	anti-parallel
Strand 4	B	75	77	anti-parallel
Strand 5	B	202	204	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	285	first strand
Strand 2	B	435	451	anti-parallel
Strand 3	B	315	318	anti-parallel
Strand 4	B	395	398	anti-parallel
Strand 5	B	403	405	anti-parallel
Strand 6	B	408	411	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	285	first strand
Strand 2	B	435	451	anti-parallel
Strand 3	B	454	460	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	290	295	first strand
Strand 2	B	416	423	anti-parallel
Strand 3	B	332	336	anti-parallel
Strand 4	B	341	347	anti-parallel
Strand 5	B	368	376	anti-parallel
Strand 6	B	379	388	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	480	485	first strand
Strand 2	B	700	706	anti-parallel
Strand 3	B	709	715	anti-parallel
Strand 4	B	732	735	anti-parallel
Strand 5	B	724	727	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	496	499	first strand
Strand 2	B	647	651	parallel
Strand 3	B	654	663	anti-parallel
Strand 4	B	691	695	anti-parallel
Strand 5	B	680	684	anti-parallel
Strand 6	B	672	674	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	533	first strand
Strand 2	B	507	519	anti-parallel
Strand 3	B	545	554	parallel
Strand 4	B	610	627	parallel
Strand 5	B	581	588	anti-parallel
Strand 6	B	538	540	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	525	533	first strand
Strand 2	B	507	519	anti-parallel
Strand 3	B	545	554	parallel
Strand 4	B	610	627	parallel
Strand 5	B	596	603	anti-parallel
Strand 6	B	562	567	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	746	748	first strand
Strand 2	B	751	753	anti-parallel
Strand 3	B	759	761	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	778	782	first strand
Strand 2	B	1160	1166	anti-parallel
Strand 3	B	1184	1188	anti-parallel
Strand 4	B	1200	1203	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	785	795	first strand
Strand 2	B	1147	1157	anti-parallel
Strand 3	B	1135	1144	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	801	803	first strand
Strand 2	B	935	937	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1217	1220	first strand
Strand 2	B	1175	1179	anti-parallel
Strand 3	B	1169	1171	anti-parallel
Strand 4	B	1228	1230	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	51	first strand
Strand 2	C	208	213	anti-parallel
Strand 3	C	223	226	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	181	first strand
Strand 2	C	169	173	anti-parallel
Strand 3	C	162	166	anti-parallel
Strand 4	C	75	77	anti-parallel
Strand 5	C	202	204	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	268	285	first strand
Strand 2	C	435	451	anti-parallel
Strand 3	C	315	318	anti-parallel
Strand 4	C	395	398	anti-parallel
Strand 5	C	403	405	anti-parallel
Strand 6	C	408	411	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	268	285	first strand
Strand 2	C	435	451	anti-parallel
Strand 3	C	454	460	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	290	295	first strand
Strand 2	C	416	423	anti-parallel
Strand 3	C	332	336	anti-parallel
Strand 4	C	341	347	anti-parallel
Strand 5	C	368	376	anti-parallel
Strand 6	C	379	388	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	480	485	first strand
Strand 2	C	700	706	anti-parallel
Strand 3	C	709	715	anti-parallel
Strand 4	C	732	735	anti-parallel
Strand 5	C	724	727	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	499	first strand
Strand 2	C	646	651	parallel
Strand 3	C	654	663	anti-parallel
Strand 4	C	691	695	anti-parallel
Strand 5	C	680	684	anti-parallel
Strand 6	C	672	674	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	525	533	first strand
Strand 2	C	510	519	anti-parallel
Strand 3	C	548	552	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	540	first strand
Strand 2	C	581	588	anti-parallel
Strand 3	C	610	627	anti-parallel
Strand 4	C	545	546	parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	540	first strand
Strand 2	C	581	588	anti-parallel
Strand 3	C	610	627	anti-parallel
Strand 4	C	596	603	anti-parallel
Strand 5	C	562	567	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	744	748	first strand
Strand 2	C	751	754	anti-parallel
Strand 3	C	759	761	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	778	782	first strand
Strand 2	C	1160	1165	anti-parallel
Strand 3	C	1184	1188	anti-parallel
Strand 4	C	1200	1203	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	785	795	first strand
Strand 2	C	1147	1157	anti-parallel
Strand 3	C	1135	1144	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	801	803	first strand
Strand 2	C	935	937	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1217	1220	first strand
Strand 2	C	1175	1179	anti-parallel
Strand 3	C	1169	1171	anti-parallel
Strand 4	C	1228	1230	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U7K

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7K