Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6U7L entry

There are 5 chains in PDB entry 6U7L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 10	VAL 167
A	GLY 169	THR 523
B	PHE 14	VAL 167
B	GLY 169	THR 523
C	THR 10	ILE 470

There are 68 helices in PDB entry 6U7L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	102	Right-handed 310
Helix 2	AA2	A	147	160	Right-handed alpha
Helix 3	AA3	A	161	164	Right-handed 310
Helix 4	AA4	A	188	199	Right-handed alpha
Helix 5	AA5	A	200	205	Right-handed 310
Helix 6	AA6	A	250	271	Right-handed alpha
Helix 7	AA7	A	294	297	Right-handed 310
Helix 8	AA8	A	298	313	Right-handed alpha
Helix 9	AA9	A	321	326	Right-handed alpha
Helix 10	AB1	A	327	336	Right-handed 310
Helix 11	AB2	A	338	356	Right-handed alpha
Helix 12	AB3	A	378	387	Right-handed alpha
Helix 13	AB4	A	388	391	Right-handed 310
Helix 14	AB5	A	418	430	Right-handed alpha
Helix 15	AB6	A	457	464	Right-handed alpha
Helix 16	AB7	A	481	498	Right-handed alpha
Helix 17	AB8	A	503	509	Right-handed alpha
Helix 18	AB9	B	98	102	Right-handed 310
Helix 19	AC1	B	147	160	Right-handed alpha
Helix 20	AC2	B	161	164	Right-handed 310
Helix 21	AC3	B	188	199	Right-handed alpha
Helix 22	AC4	B	200	205	Right-handed 310
Helix 23	AC5	B	250	270	Right-handed alpha
Helix 24	AC6	B	294	297	Right-handed 310
Helix 25	AC7	B	298	313	Right-handed alpha
Helix 26	AC8	B	321	326	Right-handed alpha
Helix 27	AC9	B	327	336	Right-handed 310
Helix 28	AD1	B	338	356	Right-handed alpha
Helix 29	AD2	B	378	387	Right-handed alpha
Helix 30	AD3	B	388	391	Right-handed 310
Helix 31	AD4	B	418	430	Right-handed alpha
Helix 32	AD5	B	457	464	Right-handed alpha
Helix 33	AD6	B	481	498	Right-handed alpha
Helix 34	AD7	B	503	509	Right-handed alpha
Helix 35	AD8	C	87	89	Right-handed 310
Helix 36	AD9	C	98	102	Right-handed 310
Helix 37	AE1	C	147	160	Right-handed alpha
Helix 38	AE2	C	161	164	Right-handed 310
Helix 39	AE3	C	188	199	Right-handed alpha
Helix 40	AE4	C	200	205	Right-handed 310
Helix 41	AE5	C	250	270	Right-handed alpha
Helix 42	AE6	C	294	297	Right-handed 310
Helix 43	AE7	C	298	313	Right-handed alpha
Helix 44	AE8	C	321	326	Right-handed alpha
Helix 45	AE9	C	327	336	Right-handed 310
Helix 46	AF1	C	338	356	Right-handed alpha
Helix 47	AF2	C	378	387	Right-handed alpha
Helix 48	AF3	C	388	391	Right-handed 310
Helix 49	AF4	C	418	429	Right-handed alpha
Helix 50	AF5	C	457	464	Right-handed alpha
Helix 51	AF6	C	481	498	Right-handed alpha
Helix 52	AF7	C	503	509	Right-handed alpha
Helix 53	AF8	D	98	102	Right-handed 310
Helix 54	AF9	D	147	160	Right-handed alpha
Helix 55	AG1	D	161	164	Right-handed 310
Helix 56	AG2	D	188	199	Right-handed alpha
Helix 57	AG3	D	200	205	Right-handed 310
Helix 58	AG4	D	250	270	Right-handed alpha
Helix 59	AG5	D	298	313	Right-handed alpha
Helix 60	AG6	D	321	326	Right-handed alpha
Helix 61	AG7	D	327	336	Right-handed 310
Helix 62	AG8	D	338	356	Right-handed alpha
Helix 63	AG9	D	379	387	Right-handed alpha
Helix 64	AH1	D	388	391	Right-handed 310
Helix 65	AH2	D	418	430	Right-handed alpha
Helix 66	AH3	D	457	464	Right-handed alpha
Helix 67	AH4	D	481	498	Right-handed alpha
Helix 68	AH5	D	503	509	Right-handed alpha

There are 20 sheets in PDB entry 6U7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	16	first strand
Strand 2	A	24	27	anti-parallel
Strand 3	A	54	56	anti-parallel
Strand 4	A	85	86	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	68	first strand
Strand 2	A	71	76	anti-parallel
Strand 3	A	91	92	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	131	first strand
Strand 2	A	119	124	anti-parallel
Strand 3	A	275	278	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	172	first strand
Strand 2	A	135	139	parallel
Strand 3	A	209	210	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	395	399	first strand
Strand 2	A	410	413	parallel
Strand 3	A	316	319	parallel
Strand 4	A	283	288	parallel
Strand 5	A	433	438	parallel
Strand 6	A	451	455	parallel
Strand 7	A	470	471	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	24	27	anti-parallel
Strand 3	B	54	56	anti-parallel
Strand 4	B	85	86	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	68	first strand
Strand 2	B	71	76	anti-parallel
Strand 3	B	91	92	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	130	131	first strand
Strand 2	B	119	124	anti-parallel
Strand 3	B	275	278	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	172	first strand
Strand 2	B	135	139	parallel
Strand 3	B	209	210	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	395	399	first strand
Strand 2	B	410	413	parallel
Strand 3	B	316	319	parallel
Strand 4	B	283	288	parallel
Strand 5	B	433	438	parallel
Strand 6	B	451	455	parallel
Strand 7	B	470	471	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	16	first strand
Strand 2	C	24	27	anti-parallel
Strand 3	C	54	56	anti-parallel
Strand 4	C	85	86	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	71	76	anti-parallel
Strand 3	C	91	92	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	119	124	anti-parallel
Strand 3	C	275	278	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	172	first strand
Strand 2	C	135	139	parallel
Strand 3	C	209	210	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	395	399	first strand
Strand 2	C	410	413	parallel
Strand 3	C	316	319	parallel
Strand 4	C	283	288	parallel
Strand 5	C	433	438	parallel
Strand 6	C	451	455	parallel
Strand 7	C	470	471	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	24	27	anti-parallel
Strand 3	D	54	56	anti-parallel
Strand 4	D	85	86	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	68	first strand
Strand 2	D	71	76	anti-parallel
Strand 3	D	91	92	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	130	131	first strand
Strand 2	D	119	124	anti-parallel
Strand 3	D	275	278	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	172	first strand
Strand 2	D	135	139	parallel
Strand 3	D	209	210	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	395	399	first strand
Strand 2	D	410	413	parallel
Strand 3	D	316	319	parallel
Strand 4	D	283	288	parallel
Strand 5	D	433	438	parallel
Strand 6	D	451	455	parallel
Strand 7	D	470	471	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6U7L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7L