Analysis of interatomic Contacts of Structural Units in PDB entry:
6U7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U7N entry

There is 1 chain in PDB entry 6U7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 43PHE 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There is 1 helix in PDB entry 6U7N. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
192 196Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 6U7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 48first strand
Strand 2
A
122 141parallel
Strand 3
A
111 119anti-parallel
Strand 4
A
63 70anti-parallel
Strand 5
A
73 77anti-parallel
Strand 6
A
80 81anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 48first strand
Strand 2
A
122 141parallel
Strand 3
A
153 162anti-parallel
Strand 4
A
185 188anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 55first strand
Strand 2
A
98 102anti-parallel
Strand 3
A
88 93anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
145 148first strand
Strand 2
A
211 229parallel
Strand 3
A
197 204anti-parallel
Strand 4
A
166 171anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
145 148first strand
Strand 2
A
211 229parallel
Strand 3
A
242 248anti-parallel
Strand 4
A
277 279anti-parallel
Strand 5
A
272 273anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
252 257first strand
Strand 2
A
293 299anti-parallel
Strand 3
A
302 308anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il