Analysis of interatomic Contacts of Structural Units in PDB entry:
6U86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U86 entry

There are 4 chains in PDB entry 6U86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 30PRO 720
B
 GLN 30PRO 720
C
 GLN 30PRO 720
D
 GLN 30PRO 720
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 6U86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 87Right-handed alpha
Helix 2
AA2
A
89 93Right-handed 310
Helix 3
AA3
A
94 103Right-handed alpha
Helix 4
AA4
A
119 127Right-handed alpha
Helix 5
AA5
A
135 147Right-handed alpha
Helix 6
AA6
A
166 174Right-handed alpha
Helix 7
AA7
A
176 185Right-handed alpha
Helix 8
AA8
A
212 219Right-handed alpha
Helix 9
AA9
A
222 231Right-handed alpha
Helix 10
AB1
A
248 257Right-handed alpha
Helix 11
AB2
A
260 282Right-handed alpha
Helix 12
AB3
A
297 306Right-handed alpha
Helix 13
AB4
A
308 316Right-handed alpha
Helix 14
AB5
A
323 327Right-handed 310
Helix 15
AB6
A
355 362Right-handed alpha
Helix 16
AB7
A
366 368Right-handed 310
Helix 17
AB8
A
369 374Right-handed alpha
Helix 18
AB9
A
377 414Right-handed alpha
Helix 19
AC1
A
430 459Right-handed alpha
Helix 20
AC2
A
461 466Right-handed alpha
Helix 21
AC3
A
470 492Right-handed alpha
Helix 22
AC4
A
496 512Right-handed alpha
Helix 23
AC5
A
513 517Right-handed 310
Helix 24
AC6
A
521 532Right-handed alpha
Helix 25
AC7
A
534 561Right-handed alpha
Helix 26
AC8
A
592 606Right-handed alpha
Helix 27
AC9
A
618 646Right-handed alpha
Helix 28
AD1
A
647 651Right-handed 310
Helix 29
AD2
A
654 673Right-handed alpha
Helix 30
AD3
A
711 719Right-handed alpha
Helix 31
AD4
B
76 87Right-handed alpha
Helix 32
AD5
B
89 93Right-handed 310
Helix 33
AD6
B
94 103Right-handed alpha
Helix 34
AD7
B
119 127Right-handed alpha
Helix 35
AD8
B
135 147Right-handed alpha
Helix 36
AD9
B
166 174Right-handed alpha
Helix 37
AE1
B
176 185Right-handed alpha
Helix 38
AE2
B
212 219Right-handed alpha
Helix 39
AE3
B
222 231Right-handed alpha
Helix 40
AE4
B
248 257Right-handed alpha
Helix 41
AE5
B
260 282Right-handed alpha
Helix 42
AE6
B
297 306Right-handed alpha
Helix 43
AE7
B
308 316Right-handed alpha
Helix 44
AE8
B
323 327Right-handed 310
Helix 45
AE9
B
355 362Right-handed alpha
Helix 46
AF1
B
366 368Right-handed 310
Helix 47
AF2
B
369 374Right-handed alpha
Helix 48
AF3
B
377 414Right-handed alpha
Helix 49
AF4
B
430 459Right-handed alpha
Helix 50
AF5
B
461 466Right-handed alpha
Helix 51
AF6
B
470 492Right-handed alpha
Helix 52
AF7
B
496 512Right-handed alpha
Helix 53
AF8
B
513 517Right-handed 310
Helix 54
AF9
B
521 532Right-handed alpha
Helix 55
AG1
B
534 561Right-handed alpha
Helix 56
AG2
B
592 606Right-handed alpha
Helix 57
AG3
B
618 646Right-handed alpha
Helix 58
AG4
B
647 651Right-handed 310
Helix 59
AG5
B
654 673Right-handed alpha
Helix 60
AG6
B
711 719Right-handed alpha
Helix 61
AG7
C
76 87Right-handed alpha
Helix 62
AG8
C
89 93Right-handed 310
Helix 63
AG9
C
94 103Right-handed alpha
Helix 64
AH1
C
119 127Right-handed alpha
Helix 65
AH2
C
135 147Right-handed alpha
Helix 66
AH3
C
166 174Right-handed alpha
Helix 67
AH4
C
176 185Right-handed alpha
Helix 68
AH5
C
212 219Right-handed alpha
Helix 69
AH6
C
222 231Right-handed alpha
Helix 70
AH7
C
248 257Right-handed alpha
Helix 71
AH8
C
260 282Right-handed alpha
Helix 72
AH9
C
297 306Right-handed alpha
Helix 73
AI1
C
308 316Right-handed alpha
Helix 74
AI2
C
323 327Right-handed 310
Helix 75
AI3
C
355 362Right-handed alpha
Helix 76
AI4
C
366 368Right-handed 310
Helix 77
AI5
C
369 374Right-handed alpha
Helix 78
AI6
C
377 414Right-handed alpha
Helix 79
AI7
C
430 459Right-handed alpha
Helix 80
AI8
C
461 466Right-handed alpha
Helix 81
AI9
C
470 492Right-handed alpha
Helix 82
AJ1
C
496 512Right-handed alpha
Helix 83
AJ2
C
513 517Right-handed 310
Helix 84
AJ3
C
521 532Right-handed alpha
Helix 85
AJ4
C
534 561Right-handed alpha
Helix 86
AJ5
C
592 606Right-handed alpha
Helix 87
AJ6
C
618 646Right-handed alpha
Helix 88
AJ7
C
647 651Right-handed 310
Helix 89
AJ8
C
654 673Right-handed alpha
Helix 90
AJ9
C
711 719Right-handed alpha
Helix 91
AK1
D
76 87Right-handed alpha
Helix 92
AK2
D
89 93Right-handed 310
Helix 93
AK3
D
94 103Right-handed alpha
Helix 94
AK4
D
119 127Right-handed alpha
Helix 95
AK5
D
135 147Right-handed alpha
Helix 96
AK6
D
166 174Right-handed alpha
Helix 97
AK7
D
176 185Right-handed alpha
Helix 98
AK8
D
212 219Right-handed alpha
Helix 99
AK9
D
222 231Right-handed alpha
Helix 100
AL1
D
248 257Right-handed alpha
Helix 101
AL2
D
260 282Right-handed alpha
Helix 102
AL3
D
297 306Right-handed alpha
Helix 103
AL4
D
308 316Right-handed alpha
Helix 104
AL5
D
323 327Right-handed 310
Helix 105
AL6
D
355 362Right-handed alpha
Helix 106
AL7
D
366 368Right-handed 310
Helix 107
AL8
D
369 374Right-handed alpha
Helix 108
AL9
D
377 414Right-handed alpha
Helix 109
AM1
D
430 459Right-handed alpha
Helix 110
AM2
D
461 466Right-handed alpha
Helix 111
AM3
D
470 492Right-handed alpha
Helix 112
AM4
D
496 512Right-handed alpha
Helix 113
AM5
D
513 517Right-handed 310
Helix 114
AM6
D
521 532Right-handed alpha
Helix 115
AM7
D
534 561Right-handed alpha
Helix 116
AM8
D
592 606Right-handed alpha
Helix 117
AM9
D
618 646Right-handed alpha
Helix 118
AN1
D
647 651Right-handed 310
Helix 119
AN2
D
654 673Right-handed alpha
Helix 120
AN3
D
711 719Right-handed alpha
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There are 4 sheets in PDB entry 6U86. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 335first strand
Strand 2
A
338 344anti-parallel
Strand 3
A
701 710anti-parallel
Strand 4
A
687 690anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 335first strand
Strand 2
B
338 344anti-parallel
Strand 3
B
701 710anti-parallel
Strand 4
B
687 690anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
329 335first strand
Strand 2
C
338 344anti-parallel
Strand 3
C
701 710anti-parallel
Strand 4
C
687 690anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
329 335first strand
Strand 2
D
338 344anti-parallel
Strand 3
D
701 710anti-parallel
Strand 4
D
687 690anti-parallel
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