Analysis of interatomic Contacts of Structural Units in PDB entry:
6U9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6U9C entry

There are 3 chains in PDB entry 6U9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 206
B
 MET 1THR 209
C
 MET 1THR 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6U9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed alpha
Helix 2
AA2
A
38 41Right-handed 310
Helix 3
AA3
A
87 91Right-handed 310
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
164 175Right-handed alpha
Helix 6
AA6
A
176 179Right-handed 310
Helix 7
AA7
A
180 187Right-handed alpha
Helix 8
AA8
A
187 192Right-handed alpha
Helix 9
AA9
A
195 206Right-handed alpha
Helix 10
AB1
B
14 16Right-handed 310
Helix 11
AB2
B
32 36Right-handed 310
Helix 12
AB3
B
38 41Right-handed 310
Helix 13
AB4
B
87 91Right-handed 310
Helix 14
AB5
B
164 175Right-handed alpha
Helix 15
AB6
B
176 179Right-handed 310
Helix 16
AB7
B
180 187Right-handed alpha
Helix 17
AB8
B
187 192Right-handed alpha
Helix 18
AB9
B
195 208Right-handed alpha
Helix 19
AC1
C
13 17Right-handed alpha
Helix 20
AC2
C
32 36Right-handed 310
Helix 21
AC3
C
38 41Right-handed 310
Helix 22
AC4
C
87 91Right-handed 310
Helix 23
AC5
C
93 97Right-handed 310
Helix 24
AC6
C
164 175Right-handed alpha
Helix 25
AC7
C
176 179Right-handed 310
Helix 26
AC8
C
180 187Right-handed alpha
Helix 27
AC9
C
187 192Right-handed alpha
Helix 28
AD1
C
195 208Right-handed alpha
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There are 9 sheets in PDB entry 6U9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
29 31anti-parallel
Strand 3
A
63 65parallel
Strand 4
A
116 117parallel
Strand 5
A
134 135parallel
Strand 6
A
149 152parallel
Strand 7
A
157 161anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
56 58parallel
Strand 3
A
109 111parallel
Strand 4
A
128 129parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
69 71parallel
Strand 3
A
122 123parallel
Strand 4
A
140 141parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
29 30anti-parallel
Strand 3
B
63 64parallel
Strand 4
B
116 117parallel
Strand 5
B
134 135parallel
Strand 6
B
149 152parallel
Strand 7
B
157 161anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
56 58parallel
Strand 3
B
109 111parallel
Strand 4
B
128 129parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
B
69 71parallel
Strand 3
B
122 123parallel
Strand 4
B
140 141parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
29 31anti-parallel
Strand 3
C
63 65parallel
Strand 4
C
116 117parallel
Strand 5
C
134 135parallel
Strand 6
C
149 152parallel
Strand 7
C
157 161anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
56 58parallel
Strand 3
C
109 111parallel
Strand 4
C
128 129parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 44first strand
Strand 2
C
69 71parallel
Strand 3
C
122 123parallel
Strand 4
C
140 141parallel
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