Analysis of interatomic Contacts of Structural Units in PDB entry:
6UAJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UAJ entry

There are 8 chains in PDB entry 6UAJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 10	PHE 514
B	THR 10	PHE 514
C	THR 10	PHE 514
D	THR 10	PHE 514
E	THR 10	PHE 514
F	THR 10	PHE 514
G	THR 10	PHE 514
H	THR 10	PHE 514

There are136 helices in PDB entry 6UAJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	49	Right-handed 310
Helix 2	AA2	A	76	85	Right-handed alpha
Helix 3	AA3	A	96	109	Right-handed alpha
Helix 4	AA4	A	126	136	Right-handed alpha
Helix 5	AA5	A	193	203	Right-handed alpha
Helix 6	AA6	A	224	233	Right-handed alpha
Helix 7	AA7	A	253	255	Right-handed 310
Helix 8	AA8	A	256	266	Right-handed alpha
Helix 9	AA9	A	280	292	Right-handed alpha
Helix 10	AB1	A	306	315	Right-handed alpha
Helix 11	AB2	A	342	355	Right-handed alpha
Helix 12	AB3	A	356	358	Right-handed 310
Helix 13	AB4	A	370	380	Right-handed alpha
Helix 14	AB5	A	416	420	Right-handed 310
Helix 15	AB6	A	452	470	Right-handed alpha
Helix 16	AB7	A	475	485	Right-handed alpha
Helix 17	AB8	A	496	502	Right-handed alpha
Helix 18	AB9	B	45	49	Right-handed 310
Helix 19	AC1	B	76	85	Right-handed alpha
Helix 20	AC2	B	96	109	Right-handed alpha
Helix 21	AC3	B	126	136	Right-handed alpha
Helix 22	AC4	B	193	203	Right-handed alpha
Helix 23	AC5	B	224	233	Right-handed alpha
Helix 24	AC6	B	253	255	Right-handed 310
Helix 25	AC7	B	256	266	Right-handed alpha
Helix 26	AC8	B	280	292	Right-handed alpha
Helix 27	AC9	B	306	315	Right-handed alpha
Helix 28	AD1	B	342	355	Right-handed alpha
Helix 29	AD2	B	356	358	Right-handed 310
Helix 30	AD3	B	370	380	Right-handed alpha
Helix 31	AD4	B	416	420	Right-handed 310
Helix 32	AD5	B	452	470	Right-handed alpha
Helix 33	AD6	B	475	485	Right-handed alpha
Helix 34	AD7	B	496	502	Right-handed alpha
Helix 35	AD8	C	45	49	Right-handed 310
Helix 36	AD9	C	76	85	Right-handed alpha
Helix 37	AE1	C	96	109	Right-handed alpha
Helix 38	AE2	C	126	136	Right-handed alpha
Helix 39	AE3	C	193	203	Right-handed alpha
Helix 40	AE4	C	224	233	Right-handed alpha
Helix 41	AE5	C	253	255	Right-handed 310
Helix 42	AE6	C	256	266	Right-handed alpha
Helix 43	AE7	C	280	292	Right-handed alpha
Helix 44	AE8	C	306	315	Right-handed alpha
Helix 45	AE9	C	342	355	Right-handed alpha
Helix 46	AF1	C	356	358	Right-handed 310
Helix 47	AF2	C	370	380	Right-handed alpha
Helix 48	AF3	C	416	420	Right-handed 310
Helix 49	AF4	C	452	470	Right-handed alpha
Helix 50	AF5	C	475	485	Right-handed alpha
Helix 51	AF6	C	496	502	Right-handed alpha
Helix 52	AF7	D	45	49	Right-handed 310
Helix 53	AF8	D	76	85	Right-handed alpha
Helix 54	AF9	D	96	109	Right-handed alpha
Helix 55	AG1	D	126	136	Right-handed alpha
Helix 56	AG2	D	193	203	Right-handed alpha
Helix 57	AG3	D	224	233	Right-handed alpha
Helix 58	AG4	D	253	255	Right-handed 310
Helix 59	AG5	D	256	266	Right-handed alpha
Helix 60	AG6	D	280	292	Right-handed alpha
Helix 61	AG7	D	306	315	Right-handed alpha
Helix 62	AG8	D	342	355	Right-handed alpha
Helix 63	AG9	D	356	358	Right-handed 310
Helix 64	AH1	D	370	380	Right-handed alpha
Helix 65	AH2	D	416	420	Right-handed 310
Helix 66	AH3	D	452	470	Right-handed alpha
Helix 67	AH4	D	475	485	Right-handed alpha
Helix 68	AH5	D	496	502	Right-handed alpha
Helix 69	AH6	E	45	49	Right-handed 310
Helix 70	AH7	E	76	85	Right-handed alpha
Helix 71	AH8	E	96	109	Right-handed alpha
Helix 72	AH9	E	126	136	Right-handed alpha
Helix 73	AI1	E	193	203	Right-handed alpha
Helix 74	AI2	E	224	233	Right-handed alpha
Helix 75	AI3	E	253	255	Right-handed 310
Helix 76	AI4	E	256	266	Right-handed alpha
Helix 77	AI5	E	280	292	Right-handed alpha
Helix 78	AI6	E	306	315	Right-handed alpha
Helix 79	AI7	E	342	355	Right-handed alpha
Helix 80	AI8	E	356	358	Right-handed 310
Helix 81	AI9	E	370	380	Right-handed alpha
Helix 82	AJ1	E	416	420	Right-handed 310
Helix 83	AJ2	E	452	470	Right-handed alpha
Helix 84	AJ3	E	475	485	Right-handed alpha
Helix 85	AJ4	E	496	502	Right-handed alpha
Helix 86	AJ5	F	45	49	Right-handed 310
Helix 87	AJ6	F	76	85	Right-handed alpha
Helix 88	AJ7	F	96	109	Right-handed alpha
Helix 89	AJ8	F	126	136	Right-handed alpha
Helix 90	AJ9	F	193	203	Right-handed alpha
Helix 91	AK1	F	224	233	Right-handed alpha
Helix 92	AK2	F	253	255	Right-handed 310
Helix 93	AK3	F	256	266	Right-handed alpha
Helix 94	AK4	F	280	292	Right-handed alpha
Helix 95	AK5	F	306	315	Right-handed alpha
Helix 96	AK6	F	342	355	Right-handed alpha
Helix 97	AK7	F	356	358	Right-handed 310
Helix 98	AK8	F	370	380	Right-handed alpha
Helix 99	AK9	F	416	420	Right-handed 310
Helix 100	AL1	F	452	470	Right-handed alpha
Helix 101	AL2	F	475	485	Right-handed alpha
Helix 102	AL3	F	496	502	Right-handed alpha
Helix 103	AL4	G	45	49	Right-handed 310
Helix 104	AL5	G	76	85	Right-handed alpha
Helix 105	AL6	G	96	109	Right-handed alpha
Helix 106	AL7	G	126	136	Right-handed alpha
Helix 107	AL8	G	193	203	Right-handed alpha
Helix 108	AL9	G	224	233	Right-handed alpha
Helix 109	AM1	G	253	255	Right-handed 310
Helix 110	AM2	G	256	266	Right-handed alpha
Helix 111	AM3	G	280	292	Right-handed alpha
Helix 112	AM4	G	306	315	Right-handed alpha
Helix 113	AM5	G	342	355	Right-handed alpha
Helix 114	AM6	G	356	358	Right-handed 310
Helix 115	AM7	G	370	380	Right-handed alpha
Helix 116	AM8	G	416	420	Right-handed 310
Helix 117	AM9	G	452	470	Right-handed alpha
Helix 118	AN1	G	475	485	Right-handed alpha
Helix 119	AN2	G	496	502	Right-handed alpha
Helix 120	AN3	H	45	49	Right-handed 310
Helix 121	AN4	H	76	85	Right-handed alpha
Helix 122	AN5	H	96	109	Right-handed alpha
Helix 123	AN6	H	126	136	Right-handed alpha
Helix 124	AN7	H	193	203	Right-handed alpha
Helix 125	AN8	H	224	233	Right-handed alpha
Helix 126	AN9	H	253	255	Right-handed 310
Helix 127	AO1	H	256	266	Right-handed alpha
Helix 128	AO2	H	280	292	Right-handed alpha
Helix 129	AO3	H	306	315	Right-handed alpha
Helix 130	AO4	H	342	355	Right-handed alpha
Helix 131	AO5	H	356	358	Right-handed 310
Helix 132	AO6	H	370	380	Right-handed alpha
Helix 133	AO7	H	416	420	Right-handed 310
Helix 134	AO8	H	452	470	Right-handed alpha
Helix 135	AO9	H	475	485	Right-handed alpha
Helix 136	AP1	H	496	502	Right-handed alpha

There are 48 sheets in PDB entry 6UAJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	490	492	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	60	61	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	66	first strand
Strand 2	A	383	385	parallel
Strand 3	A	361	363	parallel
Strand 4	A	321	323	parallel
Strand 5	A	298	304	parallel
Strand 6	A	270	273	parallel
Strand 7	A	248	250	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	145	first strand
Strand 2	A	154	158	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	209	212	parallel
Strand 3	A	218	222	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	401	403	first strand
Strand 2	A	406	410	anti-parallel
Strand 3	A	446	447	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	490	492	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	60	61	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	66	first strand
Strand 2	B	383	385	parallel
Strand 3	B	361	363	parallel
Strand 4	B	321	323	parallel
Strand 5	B	298	304	parallel
Strand 6	B	270	273	parallel
Strand 7	B	248	250	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	145	first strand
Strand 2	B	154	158	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	189	first strand
Strand 2	B	209	212	parallel
Strand 3	B	218	222	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	401	403	first strand
Strand 2	B	406	410	anti-parallel
Strand 3	B	446	447	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	490	492	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	60	61	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	66	first strand
Strand 2	C	383	385	parallel
Strand 3	C	361	363	parallel
Strand 4	C	321	323	parallel
Strand 5	C	298	304	parallel
Strand 6	C	270	273	parallel
Strand 7	C	248	250	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	145	first strand
Strand 2	C	154	158	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	188	189	first strand
Strand 2	C	209	212	parallel
Strand 3	C	218	222	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	401	403	first strand
Strand 2	C	406	410	anti-parallel
Strand 3	C	446	447	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	490	492	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	60	61	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	66	first strand
Strand 2	D	383	385	parallel
Strand 3	D	361	363	parallel
Strand 4	D	321	323	parallel
Strand 5	D	298	304	parallel
Strand 6	D	270	273	parallel
Strand 7	D	248	250	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	145	first strand
Strand 2	D	154	158	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	189	first strand
Strand 2	D	209	212	parallel
Strand 3	D	218	222	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	401	403	first strand
Strand 2	D	406	410	anti-parallel
Strand 3	D	446	447	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	37	first strand
Strand 2	E	490	492	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	60	61	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	66	first strand
Strand 2	E	383	385	parallel
Strand 3	E	361	363	parallel
Strand 4	E	321	323	parallel
Strand 5	E	298	304	parallel
Strand 6	E	270	273	parallel
Strand 7	E	248	250	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	142	145	first strand
Strand 2	E	154	158	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	188	189	first strand
Strand 2	E	209	212	parallel
Strand 3	E	218	222	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	401	403	first strand
Strand 2	E	406	410	anti-parallel
Strand 3	E	446	447	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	37	first strand
Strand 2	F	490	492	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	54	first strand
Strand 2	F	60	61	anti-parallel

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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	66	first strand
Strand 2	F	383	385	parallel
Strand 3	F	361	363	parallel
Strand 4	F	321	323	parallel
Strand 5	F	298	304	parallel
Strand 6	F	270	273	parallel
Strand 7	F	248	250	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	142	145	first strand
Strand 2	F	154	158	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	188	189	first strand
Strand 2	F	209	212	parallel
Strand 3	F	218	222	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	401	403	first strand
Strand 2	F	406	410	anti-parallel
Strand 3	F	446	447	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	37	first strand
Strand 2	G	490	492	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	54	first strand
Strand 2	G	60	61	anti-parallel

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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	65	66	first strand
Strand 2	G	383	385	parallel
Strand 3	G	361	363	parallel
Strand 4	G	321	323	parallel
Strand 5	G	298	304	parallel
Strand 6	G	270	273	parallel
Strand 7	G	248	250	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	142	145	first strand
Strand 2	G	154	158	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	188	189	first strand
Strand 2	G	209	212	parallel
Strand 3	G	218	222	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	401	403	first strand
Strand 2	G	406	410	anti-parallel
Strand 3	G	446	447	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	35	37	first strand
Strand 2	H	490	492	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	54	first strand
Strand 2	H	60	61	anti-parallel

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There are 7 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	65	66	first strand
Strand 2	H	383	385	parallel
Strand 3	H	361	363	parallel
Strand 4	H	321	323	parallel
Strand 5	H	298	304	parallel
Strand 6	H	270	273	parallel
Strand 7	H	248	250	parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	142	145	first strand
Strand 2	H	154	158	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	188	189	first strand
Strand 2	H	209	212	parallel
Strand 3	H	218	222	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	401	403	first strand
Strand 2	H	406	410	anti-parallel
Strand 3	H	446	447	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UAJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UAJ