Analysis of interatomic Contacts of Structural Units in PDB entry:
6UAN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UAN entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 6UAN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 2ASP 232
Z
ASP 3ASP 232
B
ASP 449ALA 728
B
GLU 730SER 750
C
ASP 449ALA 728
C
GLU 730LEU 733
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6UAN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
2 13Right-handed alpha
Helix 2
AA2
A
20 28Right-handed alpha
Helix 3
AA3
A
29 31Right-handed 310
Helix 4
AA4
A
38 68Right-handed alpha
Helix 5
AA5
A
76 105Right-handed alpha
Helix 6
AA6
A
106 110Right-handed 310
Helix 7
AA7
A
112 129Right-handed alpha
Helix 8
AA8
A
138 159Right-handed alpha
Helix 9
AA9
A
165 182Right-handed alpha
Helix 10
AB1
A
185 202Right-handed alpha
Helix 11
AB2
A
208 231Right-handed alpha
Helix 12
AB3
Z
4 18Right-handed alpha
Helix 13
AB4
Z
19 31Right-handed alpha
Helix 14
AB5
Z
41 69Right-handed alpha
Helix 15
AB6
Z
73 105Right-handed alpha
Helix 16
AB7
Z
105 110Right-handed alpha
Helix 17
AB8
Z
115 134Right-handed alpha
Helix 18
AB9
Z
136 155Right-handed alpha
Helix 19
AC1
Z
165 182Right-handed alpha
Helix 20
AC2
Z
188 202Right-handed alpha
Helix 21
AC3
Z
212 231Right-handed alpha
Helix 22
AC4
B
493 506Right-handed alpha
Helix 23
AC5
B
536 542Right-handed alpha
Helix 24
AC6
B
549 554Right-handed alpha
Helix 25
AC7
B
554 570Right-handed alpha
Helix 26
AC8
B
578 580Right-handed 310
Helix 27
AC9
B
584 588Right-handed 310
Helix 28
AD1
B
634 637Right-handed 310
Helix 29
AD2
B
638 652Right-handed alpha
Helix 30
AD3
B
687 695Right-handed alpha
Helix 31
AD4
B
700 704Right-handed 310
Helix 32
AD5
B
707 719Right-handed alpha
Helix 33
AD6
C
491 505Right-handed alpha
Helix 34
AD7
C
537 543Right-handed alpha
Helix 35
AD8
C
553 560Right-handed alpha
Helix 36
AD9
C
564 570Right-handed alpha
Helix 37
AE1
C
621 627Right-handed alpha
Helix 38
AE2
C
638 651Right-handed alpha
Helix 39
AE3
C
664 669Right-handed alpha
Helix 40
AE4
C
686 697Right-handed alpha
Helix 41
AE5
C
706 715Right-handed alpha
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There are 5 sheets in PDB entry 6UAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
462 466first strand
Strand 2
B
469 472anti-parallel
Strand 3
B
482 484anti-parallel
Strand 4
B
526 528anti-parallel
Strand 5
B
518 520anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
582 583first strand
Strand 2
B
591 592anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
462 465first strand
Strand 2
C
470 473anti-parallel
Strand 3
C
481 484anti-parallel
Strand 4
C
526 529anti-parallel
Strand 5
C
516 520anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
534 536first strand
Strand 2
C
582 585anti-parallel
Strand 3
C
589 592anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
572 573first strand
Strand 2
C
599 600anti-parallel
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