Analysis of interatomic Contacts of Structural Units in PDB entry:
6UAX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UAX entry

There are 2 chains in PDB entry 6UAX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 99CYS 356
B
 CYS 100ALA 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6UAX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 118Right-handed alpha
Helix 2
AA2
A
132 136Right-handed 310
Helix 3
AA3
A
138 144Right-handed alpha
Helix 4
AA4
A
158 169Right-handed alpha
Helix 5
AA5
A
191 210Right-handed alpha
Helix 6
AA6
A
229 241Right-handed alpha
Helix 7
AA7
A
265 279Right-handed alpha
Helix 8
AA8
A
295 313Right-handed alpha
Helix 9
AA9
A
342 351Right-handed alpha
Helix 10
AB1
B
110 118Right-handed alpha
Helix 11
AB2
B
132 136Right-handed 310
Helix 12
AB3
B
138 143Right-handed alpha
Helix 13
AB4
B
158 169Right-handed alpha
Helix 14
AB5
B
191 210Right-handed alpha
Helix 15
AB6
B
229 241Right-handed alpha
Helix 16
AB7
B
265 279Right-handed alpha
Helix 17
AB8
B
295 313Right-handed alpha
Helix 18
AB9
B
342 351Right-handed alpha
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There are 5 sheets in PDB entry 6UAX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
123 125parallel
Strand 3
A
102 105parallel
Strand 4
A
316 321parallel
Strand 5
A
283 290parallel
Strand 6
A
249 255parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 177first strand
Strand 2
A
212 214parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 225first strand
Strand 2
B
225 227anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 147first strand
Strand 2
B
123 125parallel
Strand 3
B
102 105parallel
Strand 4
B
316 322parallel
Strand 5
B
283 290parallel
Strand 6
B
249 255parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 177first strand
Strand 2
B
212 214parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il