Analysis of interatomic Contacts of Structural Units in PDB entry:
6UB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UB7 entry

There is 1 chain in PDB entry 6UB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10GLU 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6UB7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 21Right-handed 310
Helix 2
AA2
A
23 31Right-handed 310
Helix 3
AA3
A
70 76Right-handed 310
Helix 4
AA4
A
105 118Right-handed alpha
Helix 5
AA5
A
136 147Right-handed alpha
Helix 6
AA6
A
148 152Right-handed 310
Helix 7
AA7
A
164 180Right-handed alpha
Helix 8
AA8
A
202 220Right-handed alpha
Helix 9
AA9
A
234 239Right-handed 310
Helix 10
AB1
A
242 246Right-handed 310
Helix 11
AB2
A
255 263Right-handed alpha
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There are 2 sheets in PDB entry 6UB7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
38 40parallel
Strand 3
A
12 15parallel
Strand 4
A
223 228parallel
Strand 5
A
183 190parallel
Strand 6
A
156 162parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
127 129parallel
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