Analysis of interatomic Contacts of Structural Units in PDB entry:
6UCV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UCV entry

There are 20 chains in PDB entry 6UCV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 43	GLY 373
B	SER 86	ASP 135
C	GLU 13	TRP 49
D	PHE 27	LEU 61
E	ASP 11	VAL 60
I	TYR 45	GLY 373
J	PHE 81	ASP 135
K	GLU 13	TRP 49
L	GLN 25	LEU 61
M	ASP 11	VAL 60
a	SER 39	GLY 373
b	THR 84	ASP 135
c	GLU 13	TRP 49
d	GLN 25	LEU 61
e	ASP 11	VAL 60
i	HIS 49	GLY 373
j	SER 86	ASP 135
k	GLU 13	TRP 49
l	PHE 27	LEU 61
m	ASP 11	VAL 60

There are 39 helices in PDB entry 6UCV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	55	Right-handed alpha
Helix 2	AA2	A	67	72	Right-handed alpha
Helix 3	AA3	A	364	373	Right-handed alpha
Helix 4	AA4	B	87	135	Right-handed alpha
Helix 5	AA5	C	14	49	Right-handed alpha
Helix 6	AA6	D	30	51	Right-handed alpha
Helix 7	AA7	D	51	58	Right-handed alpha
Helix 8	AA8	E	12	31	Right-handed alpha
Helix 9	AA9	E	31	43	Right-handed alpha
Helix 10	AB1	E	49	55	Right-handed alpha
Helix 11	AB2	I	46	56	Right-handed alpha
Helix 12	AB3	I	67	72	Right-handed alpha
Helix 13	AB4	I	364	373	Right-handed alpha
Helix 14	AB5	J	82	135	Right-handed alpha
Helix 15	AB6	K	14	49	Right-handed alpha
Helix 16	AB7	L	30	51	Right-handed alpha
Helix 17	AB8	L	51	58	Right-handed alpha
Helix 18	AB9	M	12	31	Right-handed alpha
Helix 19	AC1	M	31	43	Right-handed alpha
Helix 20	AC2	M	49	55	Right-handed alpha
Helix 21	AC3	a	40	54	Right-handed alpha
Helix 22	AC4	a	364	373	Right-handed alpha
Helix 23	AC5	b	85	135	Right-handed alpha
Helix 24	AC6	c	14	49	Right-handed alpha
Helix 25	AC7	d	29	51	Right-handed alpha
Helix 26	AC8	d	51	58	Right-handed alpha
Helix 27	AC9	e	12	31	Right-handed alpha
Helix 28	AD1	e	31	43	Right-handed alpha
Helix 29	AD2	e	49	55	Right-handed alpha
Helix 30	AD3	i	50	55	Right-handed alpha
Helix 31	AD4	i	67	72	Right-handed alpha
Helix 32	AD5	i	364	373	Right-handed alpha
Helix 33	AD6	j	87	135	Right-handed alpha
Helix 34	AD7	k	14	49	Right-handed alpha
Helix 35	AD8	l	30	51	Right-handed alpha
Helix 36	AD9	l	51	57	Right-handed alpha
Helix 37	AE1	m	12	31	Right-handed alpha
Helix 38	AE2	m	31	43	Right-handed alpha
Helix 39	AE3	m	49	55	Right-handed alpha

There are 4 sheets in PDB entry 6UCV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	93	first strand
Strand 2	A	97	106	anti-parallel
Strand 3	A	114	121	anti-parallel
Strand 4	A	125	132	anti-parallel
Strand 5	A	137	144	anti-parallel
Strand 6	A	149	157	anti-parallel
Strand 7	A	164	172	anti-parallel
Strand 8	A	176	187	anti-parallel
Strand 9	A	193	203	anti-parallel
Strand 10	A	209	219	anti-parallel
Strand 11	A	227	237	anti-parallel
Strand 12	A	243	249	anti-parallel
Strand 13	A	255	262	anti-parallel
Strand 14	A	267	275	anti-parallel
Strand 15	A	299	308	anti-parallel
Strand 16	A	312	319	anti-parallel
Strand 17	A	323	330	anti-parallel
Strand 18	A	336	345	anti-parallel
Strand 19	A	350	362	anti-parallel
Strand 20	A	83	93	parallel

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There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	83	93	first strand
Strand 2	I	97	106	anti-parallel
Strand 3	I	114	121	anti-parallel
Strand 4	I	125	132	anti-parallel
Strand 5	I	137	144	anti-parallel
Strand 6	I	149	157	anti-parallel
Strand 7	I	164	172	anti-parallel
Strand 8	I	176	187	anti-parallel
Strand 9	I	193	203	anti-parallel
Strand 10	I	209	219	anti-parallel
Strand 11	I	227	237	anti-parallel
Strand 12	I	243	249	anti-parallel
Strand 13	I	255	261	anti-parallel
Strand 14	I	267	275	anti-parallel
Strand 15	I	299	308	anti-parallel
Strand 16	I	312	319	anti-parallel
Strand 17	I	323	330	anti-parallel
Strand 18	I	336	345	anti-parallel
Strand 19	I	350	362	anti-parallel
Strand 20	I	83	93	parallel

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There are 20 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	85	93	first strand
Strand 2	a	97	105	anti-parallel
Strand 3	a	114	121	anti-parallel
Strand 4	a	125	132	anti-parallel
Strand 5	a	137	144	anti-parallel
Strand 6	a	150	157	anti-parallel
Strand 7	a	164	172	anti-parallel
Strand 8	a	176	187	anti-parallel
Strand 9	a	193	203	anti-parallel
Strand 10	a	209	219	anti-parallel
Strand 11	a	227	237	anti-parallel
Strand 12	a	243	249	anti-parallel
Strand 13	a	255	261	anti-parallel
Strand 14	a	267	275	anti-parallel
Strand 15	a	299	308	anti-parallel
Strand 16	a	312	319	anti-parallel
Strand 17	a	323	330	anti-parallel
Strand 18	a	336	345	anti-parallel
Strand 19	a	350	362	anti-parallel
Strand 20	a	85	93	parallel

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There are 20 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	83	93	first strand
Strand 2	i	97	106	anti-parallel
Strand 3	i	114	121	anti-parallel
Strand 4	i	125	132	anti-parallel
Strand 5	i	137	144	anti-parallel
Strand 6	i	150	157	anti-parallel
Strand 7	i	164	172	anti-parallel
Strand 8	i	176	187	anti-parallel
Strand 9	i	193	203	anti-parallel
Strand 10	i	209	219	anti-parallel
Strand 11	i	227	237	anti-parallel
Strand 12	i	243	249	anti-parallel
Strand 13	i	255	262	anti-parallel
Strand 14	i	267	275	anti-parallel
Strand 15	i	299	308	anti-parallel
Strand 16	i	312	319	anti-parallel
Strand 17	i	323	330	anti-parallel
Strand 18	i	336	345	anti-parallel
Strand 19	i	350	362	anti-parallel
Strand 20	i	83	93	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UCV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UCV