Analysis of interatomic Contacts of Structural Units in PDB entry:
6UD5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UD5 entry

There are 4 chains in PDB entry 6UD5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 39LEU 389
B
 GLY 39LEU 389
C
 GLY 39HIS 391
D
 GLY 39HIS 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are105 helices in PDB entry 6UD5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 46Right-handed alpha
Helix 2
AA2
A
47 52Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
68 99Right-handed alpha
Helix 5
AA5
A
100 106Right-handed 310
Helix 6
AA6
A
107 128Right-handed alpha
Helix 7
AA7
A
128 133Right-handed alpha
Helix 8
AA8
A
136 141Right-handed alpha
Helix 9
AA9
A
142 147Right-handed 310
Helix 10
AB1
A
151 154Right-handed 310
Helix 11
AB2
A
155 166Right-handed alpha
Helix 12
AB3
A
168 172Right-handed 310
Helix 13
AB4
A
173 180Right-handed alpha
Helix 14
AB5
A
181 184Right-handed 310
Helix 15
AB6
A
185 198Right-handed alpha
Helix 16
AB7
A
200 211Right-handed alpha
Helix 17
AB8
A
221 244Right-handed alpha
Helix 18
AB9
A
247 267Right-handed alpha
Helix 19
AC1
A
269 279Right-handed alpha
Helix 20
AC2
A
285 298Right-handed alpha
Helix 21
AC3
A
301 303Right-handed 310
Helix 22
AC4
A
304 337Right-handed alpha
Helix 23
AC5
A
347 354Right-handed alpha
Helix 24
AC6
A
355 360Right-handed 310
Helix 25
AC7
A
362 368Right-handed alpha
Helix 26
AC8
A
369 372Right-handed 310
Helix 27
AC9
A
374 378Right-handed 310
Helix 28
AD1
A
382 389Right-handed alpha
Helix 29
AD2
B
41 46Right-handed alpha
Helix 30
AD3
B
47 52Right-handed alpha
Helix 31
AD4
B
57 62Right-handed alpha
Helix 32
AD5
B
68 99Right-handed alpha
Helix 33
AD6
B
100 106Right-handed 310
Helix 34
AD7
B
107 133Right-handed alpha
Helix 35
AD8
B
136 145Right-handed alpha
Helix 36
AD9
B
151 154Right-handed 310
Helix 37
AE1
B
155 166Right-handed alpha
Helix 38
AE2
B
180 184Right-handed 310
Helix 39
AE3
B
185 198Right-handed alpha
Helix 40
AE4
B
200 210Right-handed alpha
Helix 41
AE5
B
221 243Right-handed alpha
Helix 42
AE6
B
247 267Right-handed alpha
Helix 43
AE7
B
269 279Right-handed alpha
Helix 44
AE8
B
285 298Right-handed alpha
Helix 45
AE9
B
301 303Right-handed 310
Helix 46
AF1
B
304 337Right-handed alpha
Helix 47
AF2
B
347 354Right-handed alpha
Helix 48
AF3
B
355 360Right-handed 310
Helix 49
AF4
B
362 368Right-handed alpha
Helix 50
AF5
B
369 372Right-handed 310
Helix 51
AF6
B
374 378Right-handed 310
Helix 52
AF7
B
382 389Right-handed alpha
Helix 53
AF8
C
41 46Right-handed alpha
Helix 54
AF9
C
47 52Right-handed alpha
Helix 55
AG1
C
57 62Right-handed alpha
Helix 56
AG2
C
68 99Right-handed alpha
Helix 57
AG3
C
100 106Right-handed 310
Helix 58
AG4
C
107 128Right-handed alpha
Helix 59
AG5
C
128 133Right-handed alpha
Helix 60
AG6
C
136 141Right-handed alpha
Helix 61
AG7
C
142 147Right-handed 310
Helix 62
AG8
C
151 154Right-handed 310
Helix 63
AG9
C
155 166Right-handed alpha
Helix 64
AH1
C
168 172Right-handed 310
Helix 65
AH2
C
180 184Right-handed 310
Helix 66
AH3
C
185 198Right-handed alpha
Helix 67
AH4
C
200 211Right-handed alpha
Helix 68
AH5
C
221 243Right-handed alpha
Helix 69
AH6
C
250 267Right-handed alpha
Helix 70
AH7
C
269 279Right-handed alpha
Helix 71
AH8
C
285 298Right-handed alpha
Helix 72
AH9
C
301 303Right-handed 310
Helix 73
AI1
C
304 337Right-handed alpha
Helix 74
AI2
C
347 354Right-handed alpha
Helix 75
AI3
C
355 360Right-handed 310
Helix 76
AI4
C
362 368Right-handed alpha
Helix 77
AI5
C
369 372Right-handed 310
Helix 78
AI6
C
374 378Right-handed 310
Helix 79
AI7
C
382 389Right-handed alpha
Helix 80
AI8
D
41 46Right-handed alpha
Helix 81
AI9
D
47 52Right-handed alpha
Helix 82
AJ1
D
57 62Right-handed alpha
Helix 83
AJ2
D
68 99Right-handed alpha
Helix 84
AJ3
D
100 106Right-handed 310
Helix 85
AJ4
D
107 133Right-handed alpha
Helix 86
AJ5
D
136 142Right-handed alpha
Helix 87
AJ6
D
143 147Right-handed 310
Helix 88
AJ7
D
151 154Right-handed 310
Helix 89
AJ8
D
155 166Right-handed alpha
Helix 90
AJ9
D
168 172Right-handed 310
Helix 91
AK1
D
179 184Right-handed 310
Helix 92
AK2
D
185 198Right-handed alpha
Helix 93
AK3
D
200 211Right-handed alpha
Helix 94
AK4
D
221 243Right-handed alpha
Helix 95
AK5
D
247 267Right-handed alpha
Helix 96
AK6
D
269 279Right-handed alpha
Helix 97
AK7
D
285 298Right-handed alpha
Helix 98
AK8
D
301 303Right-handed 310
Helix 99
AK9
D
304 337Right-handed alpha
Helix 100
AL1
D
347 354Right-handed alpha
Helix 101
AL2
D
355 360Right-handed 310
Helix 102
AL3
D
362 368Right-handed alpha
Helix 103
AL4
D
369 372Right-handed 310
Helix 104
AL5
D
374 378Right-handed 310
Helix 105
AL6
D
382 389Right-handed alpha
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There are no sheets in PDB entry 6UD5
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