Analysis of interatomic Contacts of Structural Units in PDB entry:
6UE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UE2 entry

There are 8 chains in PDB entry 6UE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MSE 40PHE 82
A
ILE 84VAL 288
B
VAL 41PHE 82
B
ILE 84ARG 289
C
VAL 41PHE 82
C
ILE 84LEU 294
D
MSE 40PHE 82
D
ILE 84LEU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6UE2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
43 48Right-handed alpha
Helix 2
AA2
A
68 73Right-handed alpha
Helix 3
AA3
A
78 81Right-handed 310
Helix 4
AA4
A
82 93Right-handed alpha
Helix 5
AA5
A
112 116Right-handed 310
Helix 6
AA6
A
120 127Right-handed alpha
Helix 7
AA7
A
129 139Right-handed alpha
Helix 8
AA8
A
141 153Right-handed alpha
Helix 9
AA9
A
165 169Right-handed 310
Helix 10
AB1
A
185 198Right-handed alpha
Helix 11
AB2
A
204 215Right-handed alpha
Helix 12
AB3
A
270 286Right-handed alpha
Helix 13
AB4
B
42 48Right-handed 310
Helix 14
AB5
B
68 73Right-handed alpha
Helix 15
AB6
B
78 81Right-handed 310
Helix 16
AB7
B
82 93Right-handed alpha
Helix 17
AB8
B
112 116Right-handed 310
Helix 18
AB9
B
120 127Right-handed alpha
Helix 19
AC1
B
129 139Right-handed alpha
Helix 20
AC2
B
141 153Right-handed alpha
Helix 21
AC3
B
165 169Right-handed 310
Helix 22
AC4
B
185 198Right-handed alpha
Helix 23
AC5
B
204 215Right-handed alpha
Helix 24
AC6
B
270 286Right-handed alpha
Helix 25
AC7
C
43 48Right-handed alpha
Helix 26
AC8
C
68 73Right-handed alpha
Helix 27
AC9
C
78 81Right-handed 310
Helix 28
AD1
C
82 93Right-handed alpha
Helix 29
AD2
C
112 116Right-handed 310
Helix 30
AD3
C
120 127Right-handed alpha
Helix 31
AD4
C
129 138Right-handed alpha
Helix 32
AD5
C
141 153Right-handed alpha
Helix 33
AD6
C
165 169Right-handed 310
Helix 34
AD7
C
185 198Right-handed alpha
Helix 35
AD8
C
204 215Right-handed alpha
Helix 36
AD9
C
270 286Right-handed alpha
Helix 37
AE1
D
43 48Right-handed alpha
Helix 38
AE2
D
68 73Right-handed alpha
Helix 39
AE3
D
78 81Right-handed 310
Helix 40
AE4
D
82 93Right-handed alpha
Helix 41
AE5
D
112 116Right-handed 310
Helix 42
AE6
D
120 127Right-handed alpha
Helix 43
AE7
D
129 139Right-handed alpha
Helix 44
AE8
D
141 153Right-handed alpha
Helix 45
AE9
D
165 169Right-handed 310
Helix 46
AF1
D
185 198Right-handed alpha
Helix 47
AF2
D
204 215Right-handed alpha
Helix 48
AF3
D
270 286Right-handed alpha
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There are 4 sheets in PDB entry 6UE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
63 67first strand
Strand 2
A
52 58anti-parallel
Strand 3
A
254 262anti-parallel
Strand 4
A
240 251anti-parallel
Strand 5
A
224 235anti-parallel
Strand 6
A
216 217anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
64 67first strand
Strand 2
B
52 58anti-parallel
Strand 3
B
254 262anti-parallel
Strand 4
B
240 251anti-parallel
Strand 5
B
225 235anti-parallel
Strand 6
B
216 217anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
63 67first strand
Strand 2
C
52 58anti-parallel
Strand 3
C
254 262anti-parallel
Strand 4
C
240 251anti-parallel
Strand 5
C
225 235anti-parallel
Strand 6
C
216 217anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
64 67first strand
Strand 2
D
52 58anti-parallel
Strand 3
D
254 262anti-parallel
Strand 4
D
240 251anti-parallel
Strand 5
D
225 235anti-parallel
Strand 6
D
216 217anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il