Analysis of interatomic Contacts of Structural Units in PDB entry:
6UE6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UE6 entry

There are 8 chains in PDB entry 6UE6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 214	TYR 348
B	LEU 217	PHE 346
C	LEU 217	LEU 347
D	LEU 218	PHE 346
E	LEU 217	PHE 346
F	LEU 217	LEU 347
G	HIS 216	VAL 349
H	HIS 216	TYR 348

There are 36 helices in PDB entry 6UE6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	214	218	Right-handed 310
Helix 2	AA2	A	286	288	Right-handed 310
Helix 3	AA3	A	289	301	Right-handed alpha
Helix 4	AA4	A	303	312	Right-handed alpha
Helix 5	AA5	A	315	334	Right-handed alpha
Helix 6	AA6	A	336	345	Right-handed alpha
Helix 7	AA7	B	286	288	Right-handed 310
Helix 8	AA8	B	289	300	Right-handed alpha
Helix 9	AA9	B	315	334	Right-handed alpha
Helix 10	AB1	B	336	345	Right-handed alpha
Helix 11	AB2	C	286	290	Right-handed 310
Helix 12	AB3	C	315	334	Right-handed alpha
Helix 13	AB4	C	336	345	Right-handed alpha
Helix 14	AB5	D	286	288	Right-handed 310
Helix 15	AB6	D	289	301	Right-handed alpha
Helix 16	AB7	D	308	312	Right-handed alpha
Helix 17	AB8	D	316	334	Right-handed alpha
Helix 18	AB9	D	336	345	Right-handed alpha
Helix 19	AC1	E	286	288	Right-handed 310
Helix 20	AC2	E	289	301	Right-handed alpha
Helix 21	AC3	E	305	312	Right-handed alpha
Helix 22	AC4	E	315	334	Right-handed alpha
Helix 23	AC5	E	336	345	Right-handed alpha
Helix 24	AC6	F	286	288	Right-handed 310
Helix 25	AC7	F	289	296	Right-handed alpha
Helix 26	AC8	F	316	334	Right-handed alpha
Helix 27	AC9	F	336	345	Right-handed alpha
Helix 28	AD1	G	286	288	Right-handed 310
Helix 29	AD2	G	289	301	Right-handed alpha
Helix 30	AD3	G	315	334	Right-handed alpha
Helix 31	AD4	G	336	345	Right-handed alpha
Helix 32	AD5	H	286	288	Right-handed 310
Helix 33	AD6	H	289	301	Right-handed alpha
Helix 34	AD7	H	303	311	Right-handed alpha
Helix 35	AD8	H	315	334	Right-handed alpha
Helix 36	AD9	H	336	345	Right-handed alpha

There are 16 sheets in PDB entry 6UE6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	259	266	anti-parallel
Strand 3	A	272	277	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	253	first strand
Strand 2	A	259	266	anti-parallel
Strand 3	A	236	240	anti-parallel
Strand 4	A	225	228	anti-parallel
Strand 5	A	281	283	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	252	first strand
Strand 2	B	260	266	anti-parallel
Strand 3	B	272	277	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	252	first strand
Strand 2	B	260	266	anti-parallel
Strand 3	B	236	240	anti-parallel
Strand 4	B	225	228	anti-parallel
Strand 5	B	281	283	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	266	anti-parallel
Strand 3	C	272	277	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	253	first strand
Strand 2	C	259	266	anti-parallel
Strand 3	C	236	240	anti-parallel
Strand 4	C	225	228	anti-parallel
Strand 5	C	281	283	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	250	252	first strand
Strand 2	D	260	266	anti-parallel
Strand 3	D	272	277	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	250	252	first strand
Strand 2	D	260	266	anti-parallel
Strand 3	D	236	240	anti-parallel
Strand 4	D	225	228	anti-parallel
Strand 5	D	281	283	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	250	253	first strand
Strand 2	E	259	266	anti-parallel
Strand 3	E	272	277	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	250	253	first strand
Strand 2	E	259	266	anti-parallel
Strand 3	E	236	240	anti-parallel
Strand 4	E	225	228	anti-parallel
Strand 5	E	281	283	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	250	251	first strand
Strand 2	F	261	266	anti-parallel
Strand 3	F	272	277	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	250	251	first strand
Strand 2	F	261	266	anti-parallel
Strand 3	F	236	240	anti-parallel
Strand 4	F	225	228	anti-parallel
Strand 5	F	281	283	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	250	253	first strand
Strand 2	G	259	266	anti-parallel
Strand 3	G	272	277	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	250	253	first strand
Strand 2	G	259	266	anti-parallel
Strand 3	G	236	240	anti-parallel
Strand 4	G	225	228	anti-parallel
Strand 5	G	281	283	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	250	251	first strand
Strand 2	H	261	266	anti-parallel
Strand 3	H	272	277	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	250	251	first strand
Strand 2	H	261	266	anti-parallel
Strand 3	H	236	240	anti-parallel
Strand 4	H	225	228	anti-parallel
Strand 5	H	281	283	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UE6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UE6