Analysis of interatomic Contacts of Structural Units in PDB entry:
6UEW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UEW entry

There are 8 chains in PDB entry 6UEW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 12	ALA 493
B	GLN 5	ARG 108
C	TYR 13	ALA 493
D	MET 4	GLY 109
E	TYR 13	LYS 492
F	MET 4	ARG 108
G	TYR 13	ALA 493
H	MET 4	VAL 106

There are108 helices in PDB entry 6UEW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	18	Right-handed alpha
Helix 2	AA2	A	42	54	Right-handed alpha
Helix 3	AA3	A	62	67	Right-handed alpha
Helix 4	AA4	A	97	101	Right-handed 310
Helix 5	AA5	A	105	115	Right-handed alpha
Helix 6	AA6	A	116	120	Right-handed 310
Helix 7	AA7	A	134	139	Right-handed alpha
Helix 8	AA8	A	147	156	Right-handed alpha
Helix 9	AA9	A	174	188	Right-handed alpha
Helix 10	AB1	A	206	226	Right-handed alpha
Helix 11	AB2	A	239	254	Right-handed alpha
Helix 12	AB3	A	262	266	Right-handed alpha
Helix 13	AB4	A	266	281	Right-handed alpha
Helix 14	AB5	A	290	296	Right-handed alpha
Helix 15	AB6	A	303	315	Right-handed alpha
Helix 16	AB7	A	333	344	Right-handed alpha
Helix 17	AB8	A	350	354	Right-handed 310
Helix 18	AB9	A	376	378	Right-handed 310
Helix 19	AC1	A	379	388	Right-handed alpha
Helix 20	AC2	A	396	401	Right-handed alpha
Helix 21	AC3	A	405	426	Right-handed alpha
Helix 22	AC4	A	433	443	Right-handed alpha
Helix 23	AC5	A	445	455	Right-handed alpha
Helix 24	AC6	A	477	491	Right-handed alpha
Helix 25	AC7	B	23	37	Right-handed alpha
Helix 26	AC8	B	49	51	Right-handed 310
Helix 27	AC9	B	68	83	Right-handed alpha
Helix 28	AD1	C	14	18	Right-handed alpha
Helix 29	AD2	C	42	54	Right-handed alpha
Helix 30	AD3	C	64	68	Right-handed 310
Helix 31	AD4	C	97	101	Right-handed 310
Helix 32	AD5	C	105	115	Right-handed alpha
Helix 33	AD6	C	116	120	Right-handed 310
Helix 34	AD7	C	134	139	Right-handed alpha
Helix 35	AD8	C	147	156	Right-handed alpha
Helix 36	AD9	C	174	188	Right-handed alpha
Helix 37	AE1	C	206	226	Right-handed alpha
Helix 38	AE2	C	239	253	Right-handed alpha
Helix 39	AE3	C	262	266	Right-handed alpha
Helix 40	AE4	C	266	281	Right-handed alpha
Helix 41	AE5	C	290	296	Right-handed alpha
Helix 42	AE6	C	303	315	Right-handed alpha
Helix 43	AE7	C	333	344	Right-handed alpha
Helix 44	AE8	C	350	354	Right-handed 310
Helix 45	AE9	C	376	378	Right-handed 310
Helix 46	AF1	C	379	388	Right-handed alpha
Helix 47	AF2	C	396	401	Right-handed alpha
Helix 48	AF3	C	405	426	Right-handed alpha
Helix 49	AF4	C	433	443	Right-handed alpha
Helix 50	AF5	C	445	455	Right-handed alpha
Helix 51	AF6	C	476	491	Right-handed alpha
Helix 52	AF7	D	23	37	Right-handed alpha
Helix 53	AF8	D	47	51	Right-handed 310
Helix 54	AF9	D	68	83	Right-handed alpha
Helix 55	AG1	E	14	18	Right-handed alpha
Helix 56	AG2	E	42	54	Right-handed alpha
Helix 57	AG3	E	64	68	Right-handed 310
Helix 58	AG4	E	97	101	Right-handed 310
Helix 59	AG5	E	105	115	Right-handed alpha
Helix 60	AG6	E	116	120	Right-handed 310
Helix 61	AG7	E	134	139	Right-handed alpha
Helix 62	AG8	E	147	156	Right-handed alpha
Helix 63	AG9	E	174	188	Right-handed alpha
Helix 64	AH1	E	206	226	Right-handed alpha
Helix 65	AH2	E	239	254	Right-handed alpha
Helix 66	AH3	E	262	266	Right-handed alpha
Helix 67	AH4	E	266	281	Right-handed alpha
Helix 68	AH5	E	290	296	Right-handed alpha
Helix 69	AH6	E	303	315	Right-handed alpha
Helix 70	AH7	E	334	344	Right-handed alpha
Helix 71	AH8	E	350	354	Right-handed 310
Helix 72	AH9	E	376	378	Right-handed 310
Helix 73	AI1	E	379	388	Right-handed alpha
Helix 74	AI2	E	396	401	Right-handed alpha
Helix 75	AI3	E	405	427	Right-handed alpha
Helix 76	AI4	E	433	442	Right-handed alpha
Helix 77	AI5	E	445	455	Right-handed alpha
Helix 78	AI6	E	477	491	Right-handed alpha
Helix 79	AI7	F	24	37	Right-handed alpha
Helix 80	AI8	F	47	51	Right-handed 310
Helix 81	AI9	F	68	83	Right-handed alpha
Helix 82	AJ1	G	14	18	Right-handed alpha
Helix 83	AJ2	G	42	54	Right-handed alpha
Helix 84	AJ3	G	62	68	Right-handed 310
Helix 85	AJ4	G	97	101	Right-handed 310
Helix 86	AJ5	G	105	115	Right-handed alpha
Helix 87	AJ6	G	116	120	Right-handed 310
Helix 88	AJ7	G	134	139	Right-handed alpha
Helix 89	AJ8	G	147	156	Right-handed alpha
Helix 90	AJ9	G	174	189	Right-handed alpha
Helix 91	AK1	G	206	226	Right-handed alpha
Helix 92	AK2	G	239	254	Right-handed alpha
Helix 93	AK3	G	262	266	Right-handed alpha
Helix 94	AK4	G	266	280	Right-handed alpha
Helix 95	AK5	G	291	296	Right-handed alpha
Helix 96	AK6	G	303	315	Right-handed alpha
Helix 97	AK7	G	332	344	Right-handed alpha
Helix 98	AK8	G	350	354	Right-handed 310
Helix 99	AK9	G	376	378	Right-handed 310
Helix 100	AL1	G	379	388	Right-handed alpha
Helix 101	AL2	G	396	401	Right-handed alpha
Helix 102	AL3	G	405	427	Right-handed alpha
Helix 103	AL4	G	433	443	Right-handed alpha
Helix 104	AL5	G	445	453	Right-handed alpha
Helix 105	AL6	G	477	491	Right-handed alpha
Helix 106	AL7	H	23	37	Right-handed alpha
Helix 107	AL8	H	47	51	Right-handed 310
Helix 108	AL9	H	69	83	Right-handed alpha

There are 16 sheets in PDB entry 6UEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	83	first strand
Strand 2	A	86	96	anti-parallel
Strand 3	A	29	37	anti-parallel
Strand 4	A	123	132	anti-parallel
Strand 5	A	301	302	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	166	first strand
Strand 2	A	192	194	parallel
Strand 3	A	230	234	parallel
Strand 4	A	257	261	parallel
Strand 5	A	283	287	parallel
Strand 6	A	318	320	parallel
Strand 7	A	368	371	parallel
Strand 8	A	391	395	parallel
Strand 9	A	162	166	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	347	first strand
Strand 2	A	359	360	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	58	first strand
Strand 2	B	40	47	anti-parallel
Strand 3	B	86	94	anti-parallel
Strand 4	B	99	107	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	83	first strand
Strand 2	C	86	96	anti-parallel
Strand 3	C	29	37	anti-parallel
Strand 4	C	123	132	anti-parallel
Strand 5	C	301	302	parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	166	first strand
Strand 2	C	192	194	parallel
Strand 3	C	230	234	parallel
Strand 4	C	257	261	parallel
Strand 5	C	283	287	parallel
Strand 6	C	318	320	parallel
Strand 7	C	368	371	parallel
Strand 8	C	391	395	parallel
Strand 9	C	162	166	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	347	first strand
Strand 2	C	359	360	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	58	first strand
Strand 2	D	40	46	anti-parallel
Strand 3	D	87	94	anti-parallel
Strand 4	D	99	107	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	82	first strand
Strand 2	E	90	96	anti-parallel
Strand 3	E	29	37	anti-parallel
Strand 4	E	123	132	anti-parallel
Strand 5	E	301	302	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	162	166	first strand
Strand 2	E	192	194	parallel
Strand 3	E	230	234	parallel
Strand 4	E	257	261	parallel
Strand 5	E	283	287	parallel
Strand 6	E	318	320	parallel
Strand 7	E	368	371	parallel
Strand 8	E	391	394	parallel
Strand 9	E	162	166	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	346	347	first strand
Strand 2	E	359	360	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	59	first strand
Strand 2	F	40	46	anti-parallel
Strand 3	F	87	94	anti-parallel
Strand 4	F	99	107	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	83	first strand
Strand 2	G	86	96	anti-parallel
Strand 3	G	29	37	anti-parallel
Strand 4	G	123	132	anti-parallel
Strand 5	G	301	302	parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	162	166	first strand
Strand 2	G	192	194	parallel
Strand 3	G	230	234	parallel
Strand 4	G	257	261	parallel
Strand 5	G	283	287	parallel
Strand 6	G	318	320	parallel
Strand 7	G	368	371	parallel
Strand 8	G	391	395	parallel
Strand 9	G	162	166	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	346	347	first strand
Strand 2	G	359	360	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	40	46	anti-parallel
Strand 3	H	87	94	anti-parallel
Strand 4	H	99	105	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UEW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UEW