Analysis of interatomic Contacts of Structural Units in PDB entry:
6UFF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UFF entry

There are 8 chains in PDB entry 6UFF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 37	ALA 398
B	ASN 41	ALA 398
C	SER 39	ALA 400
D	ILE 37	ALA 398
E	MET 38	LEU 397
F	ASN 41	ALA 400
G	ASN 41	ALA 398
H	ASN 41	ALA 398

There are152 helices in PDB entry 6UFF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	70	74	Right-handed 310
Helix 2	AA2	A	76	86	Right-handed alpha
Helix 3	AA3	A	100	104	Right-handed 310
Helix 4	AA4	A	114	131	Right-handed alpha
Helix 5	AA5	A	147	155	Right-handed 310
Helix 6	AA6	A	185	187	Right-handed 310
Helix 7	AA7	A	188	206	Right-handed alpha
Helix 8	AA8	A	219	226	Right-handed alpha
Helix 9	AA9	A	239	244	Right-handed alpha
Helix 10	AB1	A	244	255	Right-handed alpha
Helix 11	AB2	A	259	261	Right-handed 310
Helix 12	AB3	A	280	292	Right-handed alpha
Helix 13	AB4	A	293	296	Right-handed 310
Helix 14	AB5	A	306	313	Right-handed alpha
Helix 15	AB6	A	318	324	Right-handed alpha
Helix 16	AB7	A	337	347	Right-handed alpha
Helix 17	AB8	A	356	362	Right-handed alpha
Helix 18	AB9	A	364	371	Right-handed alpha
Helix 19	AC1	A	379	383	Right-handed 310
Helix 20	AC2	B	70	74	Right-handed 310
Helix 21	AC3	B	76	86	Right-handed alpha
Helix 22	AC4	B	100	104	Right-handed 310
Helix 23	AC5	B	114	131	Right-handed alpha
Helix 24	AC6	B	147	151	Right-handed 310
Helix 25	AC7	B	185	187	Right-handed 310
Helix 26	AC8	B	188	206	Right-handed alpha
Helix 27	AC9	B	219	226	Right-handed alpha
Helix 28	AD1	B	239	244	Right-handed alpha
Helix 29	AD2	B	244	255	Right-handed alpha
Helix 30	AD3	B	259	261	Right-handed 310
Helix 31	AD4	B	280	292	Right-handed alpha
Helix 32	AD5	B	293	296	Right-handed 310
Helix 33	AD6	B	306	312	Right-handed alpha
Helix 34	AD7	B	318	324	Right-handed alpha
Helix 35	AD8	B	337	347	Right-handed alpha
Helix 36	AD9	B	356	362	Right-handed alpha
Helix 37	AE1	B	364	371	Right-handed alpha
Helix 38	AE2	B	379	383	Right-handed 310
Helix 39	AE3	C	70	74	Right-handed 310
Helix 40	AE4	C	76	85	Right-handed alpha
Helix 41	AE5	C	100	104	Right-handed 310
Helix 42	AE6	C	114	131	Right-handed alpha
Helix 43	AE7	C	147	155	Right-handed 310
Helix 44	AE8	C	185	187	Right-handed 310
Helix 45	AE9	C	188	206	Right-handed alpha
Helix 46	AF1	C	219	226	Right-handed alpha
Helix 47	AF2	C	239	244	Right-handed alpha
Helix 48	AF3	C	244	255	Right-handed alpha
Helix 49	AF4	C	259	261	Right-handed 310
Helix 50	AF5	C	280	292	Right-handed alpha
Helix 51	AF6	C	293	296	Right-handed 310
Helix 52	AF7	C	306	314	Right-handed alpha
Helix 53	AF8	C	318	324	Right-handed alpha
Helix 54	AF9	C	337	347	Right-handed alpha
Helix 55	AG1	C	356	362	Right-handed alpha
Helix 56	AG2	C	364	371	Right-handed alpha
Helix 57	AG3	C	379	383	Right-handed 310
Helix 58	AG4	D	70	74	Right-handed 310
Helix 59	AG5	D	76	85	Right-handed alpha
Helix 60	AG6	D	100	104	Right-handed 310
Helix 61	AG7	D	114	131	Right-handed alpha
Helix 62	AG8	D	147	155	Right-handed 310
Helix 63	AG9	D	185	187	Right-handed 310
Helix 64	AH1	D	188	206	Right-handed alpha
Helix 65	AH2	D	219	226	Right-handed alpha
Helix 66	AH3	D	239	244	Right-handed alpha
Helix 67	AH4	D	244	255	Right-handed alpha
Helix 68	AH5	D	259	261	Right-handed 310
Helix 69	AH6	D	280	292	Right-handed alpha
Helix 70	AH7	D	293	296	Right-handed 310
Helix 71	AH8	D	306	313	Right-handed alpha
Helix 72	AH9	D	318	324	Right-handed alpha
Helix 73	AI1	D	337	347	Right-handed alpha
Helix 74	AI2	D	356	362	Right-handed alpha
Helix 75	AI3	D	364	371	Right-handed alpha
Helix 76	AI4	D	379	383	Right-handed 310
Helix 77	AI5	E	70	74	Right-handed 310
Helix 78	AI6	E	76	85	Right-handed alpha
Helix 79	AI7	E	100	104	Right-handed 310
Helix 80	AI8	E	114	131	Right-handed alpha
Helix 81	AI9	E	147	155	Right-handed 310
Helix 82	AJ1	E	185	187	Right-handed 310
Helix 83	AJ2	E	188	206	Right-handed alpha
Helix 84	AJ3	E	219	226	Right-handed alpha
Helix 85	AJ4	E	239	244	Right-handed alpha
Helix 86	AJ5	E	244	255	Right-handed alpha
Helix 87	AJ6	E	259	261	Right-handed 310
Helix 88	AJ7	E	280	292	Right-handed alpha
Helix 89	AJ8	E	293	296	Right-handed 310
Helix 90	AJ9	E	306	312	Right-handed alpha
Helix 91	AK1	E	318	324	Right-handed alpha
Helix 92	AK2	E	337	347	Right-handed alpha
Helix 93	AK3	E	356	362	Right-handed alpha
Helix 94	AK4	E	364	371	Right-handed alpha
Helix 95	AK5	E	379	383	Right-handed 310
Helix 96	AK6	F	70	74	Right-handed 310
Helix 97	AK7	F	76	86	Right-handed alpha
Helix 98	AK8	F	100	104	Right-handed 310
Helix 99	AK9	F	114	131	Right-handed alpha
Helix 100	AL1	F	147	151	Right-handed 310
Helix 101	AL2	F	185	187	Right-handed 310
Helix 102	AL3	F	188	206	Right-handed alpha
Helix 103	AL4	F	219	226	Right-handed alpha
Helix 104	AL5	F	239	244	Right-handed alpha
Helix 105	AL6	F	244	255	Right-handed alpha
Helix 106	AL7	F	259	261	Right-handed 310
Helix 107	AL8	F	280	292	Right-handed alpha
Helix 108	AL9	F	293	296	Right-handed 310
Helix 109	AM1	F	306	312	Right-handed alpha
Helix 110	AM2	F	318	324	Right-handed alpha
Helix 111	AM3	F	337	347	Right-handed alpha
Helix 112	AM4	F	356	362	Right-handed alpha
Helix 113	AM5	F	364	371	Right-handed alpha
Helix 114	AM6	F	379	383	Right-handed 310
Helix 115	AM7	F	396	400	Right-handed 310
Helix 116	AM8	G	70	74	Right-handed 310
Helix 117	AM9	G	76	86	Right-handed alpha
Helix 118	AN1	G	100	104	Right-handed 310
Helix 119	AN2	G	114	131	Right-handed alpha
Helix 120	AN3	G	185	187	Right-handed 310
Helix 121	AN4	G	188	206	Right-handed alpha
Helix 122	AN5	G	219	226	Right-handed alpha
Helix 123	AN6	G	239	244	Right-handed alpha
Helix 124	AN7	G	244	255	Right-handed alpha
Helix 125	AN8	G	259	261	Right-handed 310
Helix 126	AN9	G	280	292	Right-handed alpha
Helix 127	AO1	G	293	296	Right-handed 310
Helix 128	AO2	G	306	312	Right-handed alpha
Helix 129	AO3	G	318	324	Right-handed alpha
Helix 130	AO4	G	337	347	Right-handed alpha
Helix 131	AO5	G	356	362	Right-handed alpha
Helix 132	AO6	G	364	371	Right-handed alpha
Helix 133	AO7	G	379	383	Right-handed 310
Helix 134	AO8	H	70	74	Right-handed 310
Helix 135	AO9	H	76	86	Right-handed alpha
Helix 136	AP1	H	100	104	Right-handed 310
Helix 137	AP2	H	114	131	Right-handed alpha
Helix 138	AP3	H	147	151	Right-handed 310
Helix 139	AP4	H	185	187	Right-handed 310
Helix 140	AP5	H	188	206	Right-handed alpha
Helix 141	AP6	H	219	226	Right-handed alpha
Helix 142	AP7	H	239	244	Right-handed alpha
Helix 143	AP8	H	244	255	Right-handed alpha
Helix 144	AP9	H	259	261	Right-handed 310
Helix 145	AQ1	H	280	292	Right-handed alpha
Helix 146	AQ2	H	293	296	Right-handed 310
Helix 147	AQ3	H	306	312	Right-handed alpha
Helix 148	AQ4	H	318	324	Right-handed alpha
Helix 149	AQ5	H	337	347	Right-handed alpha
Helix 150	AQ6	H	356	362	Right-handed alpha
Helix 151	AQ7	H	364	371	Right-handed alpha
Helix 152	AQ8	H	379	383	Right-handed 310

There are 32 sheets in PDB entry 6UFF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	53	55	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	61	first strand
Strand 2	A	91	98	parallel
Strand 3	A	135	140	parallel
Strand 4	A	210	214	parallel
Strand 5	A	263	267	parallel
Strand 6	A	299	303	parallel
Strand 7	A	330	333	parallel
Strand 8	A	352	355	parallel
Strand 9	A	59	61	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	159	first strand
Strand 2	A	182	183	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	171	first strand
Strand 2	A	174	177	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	53	55	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	61	first strand
Strand 2	B	91	98	parallel
Strand 3	B	135	140	parallel
Strand 4	B	210	214	parallel
Strand 5	B	263	267	parallel
Strand 6	B	299	303	parallel
Strand 7	B	330	333	parallel
Strand 8	B	352	355	parallel
Strand 9	B	59	61	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	159	first strand
Strand 2	B	182	183	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	171	first strand
Strand 2	B	174	177	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	50	first strand
Strand 2	C	53	55	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	91	98	parallel
Strand 3	C	135	140	parallel
Strand 4	C	210	214	parallel
Strand 5	C	263	267	parallel
Strand 6	C	299	303	parallel
Strand 7	C	330	333	parallel
Strand 8	C	352	355	parallel
Strand 9	C	59	61	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	159	first strand
Strand 2	C	182	183	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	171	first strand
Strand 2	C	174	177	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	D	53	55	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	61	first strand
Strand 2	D	91	98	parallel
Strand 3	D	135	140	parallel
Strand 4	D	210	214	parallel
Strand 5	D	263	267	parallel
Strand 6	D	299	303	parallel
Strand 7	D	330	333	parallel
Strand 8	D	352	355	parallel
Strand 9	D	59	61	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	159	first strand
Strand 2	D	182	183	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	171	first strand
Strand 2	D	174	177	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	50	first strand
Strand 2	E	53	55	anti-parallel

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There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	61	first strand
Strand 2	E	91	98	parallel
Strand 3	E	135	140	parallel
Strand 4	E	210	214	parallel
Strand 5	E	263	267	parallel
Strand 6	E	299	303	parallel
Strand 7	E	330	333	parallel
Strand 8	E	352	355	parallel
Strand 9	E	59	61	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	159	first strand
Strand 2	E	182	183	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	171	first strand
Strand 2	E	174	177	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	50	first strand
Strand 2	F	53	55	anti-parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	61	first strand
Strand 2	F	91	98	parallel
Strand 3	F	135	140	parallel
Strand 4	F	210	214	parallel
Strand 5	F	263	267	parallel
Strand 6	F	299	303	parallel
Strand 7	F	330	333	parallel
Strand 8	F	352	355	parallel
Strand 9	F	59	61	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	158	159	first strand
Strand 2	F	182	183	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	171	first strand
Strand 2	F	174	177	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	48	50	first strand
Strand 2	G	53	55	anti-parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	61	first strand
Strand 2	G	91	98	parallel
Strand 3	G	135	140	parallel
Strand 4	G	210	214	parallel
Strand 5	G	263	267	parallel
Strand 6	G	299	303	parallel
Strand 7	G	330	333	parallel
Strand 8	G	352	355	parallel
Strand 9	G	59	61	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	159	first strand
Strand 2	G	182	183	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	168	169	first strand
Strand 2	G	176	177	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	48	50	first strand
Strand 2	H	53	55	anti-parallel

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There are 9 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	61	first strand
Strand 2	H	91	98	parallel
Strand 3	H	135	140	parallel
Strand 4	H	210	214	parallel
Strand 5	H	263	267	parallel
Strand 6	H	299	303	parallel
Strand 7	H	330	333	parallel
Strand 8	H	352	355	parallel
Strand 9	H	59	61	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	159	first strand
Strand 2	H	182	183	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	168	171	first strand
Strand 2	H	174	177	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UFF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UFF