Analysis of interatomic Contacts of Structural Units in PDB entry:
6UFV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UFV entry

There is 1 chain in PDB entry 6UFV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 351ASN 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6UFV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
412 414Right-handed 310
Helix 2
AA2
A
465 469Right-handed 310
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There are 3 sheets in PDB entry 6UFV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 409first strand
Strand 2
A
452 458anti-parallel
Strand 3
A
372 378anti-parallel
Strand 4
A
354 360anti-parallel
Strand 5
A
479 480anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 385first strand
Strand 2
A
442 443anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 427first strand
Strand 2
A
430 438anti-parallel
Strand 3
A
389 395anti-parallel
Strand 4
A
484 488anti-parallel
Strand 5
A
491 494anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il