Analysis of interatomic Contacts of Structural Units in PDB entry:
6UH2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UH2 entry

There are 2 chains in PDB entry 6UH2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -5ILE 253
B
 ALA -6ILE 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6UH2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
22 35Right-handed alpha
Helix 3
AA3
A
65 79Right-handed alpha
Helix 4
AA4
A
97 101Right-handed 310
Helix 5
AA5
A
102 132Right-handed alpha
Helix 6
AA6
A
142 146Right-handed 310
Helix 7
AA7
A
150 154Right-handed 310
Helix 8
AA8
A
162 184Right-handed alpha
Helix 9
AA9
A
185 187Right-handed 310
Helix 10
AB1
A
203 214Right-handed alpha
Helix 11
AB2
A
221 224Right-handed 310
Helix 12
AB3
A
225 233Right-handed alpha
Helix 13
AB4
A
234 238Right-handed 310
Helix 14
AB5
B
4 11Right-handed alpha
Helix 15
AB6
B
22 35Right-handed alpha
Helix 16
AB7
B
65 79Right-handed alpha
Helix 17
AB8
B
97 101Right-handed 310
Helix 18
AB9
B
102 132Right-handed alpha
Helix 19
AC1
B
142 146Right-handed 310
Helix 20
AC2
B
150 154Right-handed 310
Helix 21
AC3
B
162 184Right-handed alpha
Helix 22
AC4
B
185 187Right-handed 310
Helix 23
AC5
B
203 213Right-handed alpha
Helix 24
AC6
B
222 233Right-handed alpha
Helix 25
AC7
B
234 238Right-handed 310
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There are 3 sheets in PDB entry 6UH2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-4 4first strand
Strand 2
B
-5 3parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
38 43parallel
Strand 3
A
14 18parallel
Strand 4
A
85 88parallel
Strand 5
A
136 140parallel
Strand 6
A
189 195parallel
Strand 7
A
244 247parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
38 43parallel
Strand 3
B
14 18parallel
Strand 4
B
85 88parallel
Strand 5
B
136 140parallel
Strand 6
B
189 195parallel
Strand 7
B
244 247parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il