Analysis of interatomic Contacts of Structural Units in PDB entry:
6UH4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UH4 entry

There are 4 chains in PDB entry 6UH4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 329
B	MET 1	PRO 326
C	MET 1	PRO 326
D	MET 1	SER 298

There are 25 helices in PDB entry 6UH4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	101	109	Right-handed alpha
Helix 2	AA2	A	112	122	Right-handed alpha
Helix 3	AA3	A	178	193	Right-handed alpha
Helix 4	AA4	A	203	218	Right-handed alpha
Helix 5	AA5	A	223	239	Right-handed alpha
Helix 6	AA6	A	284	286	Right-handed 310
Helix 7	AA7	B	101	110	Right-handed alpha
Helix 8	AA8	B	112	121	Right-handed alpha
Helix 9	AA9	B	178	192	Right-handed alpha
Helix 10	AB1	B	203	218	Right-handed alpha
Helix 11	AB2	B	223	239	Right-handed alpha
Helix 12	AB3	B	284	286	Right-handed 310
Helix 13	AB4	C	10	12	Right-handed 310
Helix 14	AB5	C	99	110	Right-handed alpha
Helix 15	AB6	C	112	122	Right-handed alpha
Helix 16	AB7	C	178	192	Right-handed alpha
Helix 17	AB8	C	203	218	Right-handed alpha
Helix 18	AB9	C	223	239	Right-handed alpha
Helix 19	AC1	C	284	286	Right-handed 310
Helix 20	AC2	D	101	108	Right-handed alpha
Helix 21	AC3	D	112	121	Right-handed alpha
Helix 22	AC4	D	178	193	Right-handed alpha
Helix 23	AC5	D	203	215	Right-handed alpha
Helix 24	AC6	D	223	239	Right-handed alpha
Helix 25	AC7	D	284	286	Right-handed 310

There are 17 sheets in PDB entry 6UH4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	173	first strand
Strand 2	A	4	9	anti-parallel
Strand 3	A	13	22	anti-parallel
Strand 4	A	254	262	anti-parallel
Strand 5	A	267	272	anti-parallel
Strand 6	A	279	282	anti-parallel
Strand 7	A	307	308	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	69	first strand
Strand 2	A	56	61	anti-parallel
Strand 3	A	29	33	anti-parallel
Strand 4	A	295	297	anti-parallel
Strand 5	A	314	315	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	49	51	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	81	first strand
Strand 2	A	141	146	anti-parallel
Strand 3	A	152	158	anti-parallel
Strand 4	A	161	167	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	98	first strand
Strand 2	A	126	128	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	173	first strand
Strand 2	B	4	9	anti-parallel
Strand 3	B	13	22	anti-parallel
Strand 4	B	254	262	anti-parallel
Strand 5	B	267	272	anti-parallel
Strand 6	B	279	282	anti-parallel
Strand 7	B	307	308	parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	167	first strand
Strand 2	B	152	158	anti-parallel
Strand 3	B	141	146	anti-parallel
Strand 4	B	76	81	anti-parallel
Strand 5	B	65	71	anti-parallel
Strand 6	B	56	61	anti-parallel
Strand 7	B	30	33	anti-parallel
Strand 8	B	295	297	anti-parallel
Strand 9	B	314	315	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	97	first strand
Strand 2	B	126	127	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	173	first strand
Strand 2	C	4	9	anti-parallel
Strand 3	C	13	22	anti-parallel
Strand 4	C	254	262	anti-parallel
Strand 5	C	267	272	anti-parallel
Strand 6	C	279	282	anti-parallel
Strand 7	C	307	308	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	166	first strand
Strand 2	C	152	155	anti-parallel
Strand 3	C	141	146	anti-parallel
Strand 4	C	76	81	anti-parallel
Strand 5	C	66	70	anti-parallel
Strand 6	C	56	60	anti-parallel
Strand 7	C	29	33	anti-parallel
Strand 8	C	295	297	anti-parallel
Strand 9	C	314	315	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	40	first strand
Strand 2	C	49	51	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	98	first strand
Strand 2	C	126	128	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	9	first strand
Strand 2	D	13	22	anti-parallel
Strand 3	D	254	262	anti-parallel
Strand 4	D	267	272	anti-parallel
Strand 5	D	279	282	anti-parallel
Strand 6	D	307	308	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	70	first strand
Strand 2	D	56	60	anti-parallel
Strand 3	D	29	33	anti-parallel
Strand 4	D	295	297	anti-parallel
Strand 5	D	314	315	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	40	first strand
Strand 2	D	49	51	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	81	first strand
Strand 2	D	141	146	anti-parallel
Strand 3	D	152	155	anti-parallel
Strand 4	D	164	166	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	98	first strand
Strand 2	D	126	128	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UH4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UH4