Analysis of interatomic Contacts of Structural Units in PDB entry:
6UH5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UH5 entry

There are 19 chains in PDB entry 6UH5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 37	ARG 134
B	LYS 20	GLY 101
C	ALA 12	LYS 118
D	THR 29	ALA 121
E	ARG 40	ARG 134
F	ARG 17	GLY 102
G	ALA 12	LYS 118
H	THR 29	ALA 121
I	T 2	T 147
J	A 1	A 146
K	MET 16	VAL 326
M	TYR 726	LEU 999
N	ALA 2	ALA 435
Q	MET 1	CYS 76
R	ALA 1	ARG 8
X	LYS 195	PHE 327
L	SER 2	ILE 403
O	SER 85	SER 126
P	PRO 78	SER 126

There are 64 helices in PDB entry 6UH5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	46	55	Right-handed alpha
Helix 2	AA2	A	64	75	Right-handed alpha
Helix 3	AA3	A	76	78	Right-handed 310
Helix 4	AA4	A	86	114	Right-handed alpha
Helix 5	AA5	A	120	131	Right-handed alpha
Helix 6	AA6	B	25	29	Right-handed 310
Helix 7	AA7	B	30	41	Right-handed alpha
Helix 8	AA8	B	49	76	Right-handed alpha
Helix 9	AA9	B	82	93	Right-handed alpha
Helix 10	AB1	C	16	22	Right-handed alpha
Helix 11	AB2	C	26	37	Right-handed alpha
Helix 12	AB3	C	46	73	Right-handed alpha
Helix 13	AB4	C	79	90	Right-handed alpha
Helix 14	AB5	C	91	97	Right-handed alpha
Helix 15	AB6	D	34	46	Right-handed alpha
Helix 16	AB7	D	53	77	Right-handed alpha
Helix 17	AB8	D	87	99	Right-handed alpha
Helix 18	AB9	D	101	120	Right-handed alpha
Helix 19	AC1	E	44	57	Right-handed alpha
Helix 20	AC2	E	64	79	Right-handed alpha
Helix 21	AC3	E	89	114	Right-handed alpha
Helix 22	AC4	E	120	132	Right-handed alpha
Helix 23	AC5	F	25	29	Right-handed 310
Helix 24	AC6	F	30	41	Right-handed alpha
Helix 25	AC7	F	49	52	Right-handed 310
Helix 26	AC8	F	53	77	Right-handed alpha
Helix 27	AC9	F	82	93	Right-handed alpha
Helix 28	AD1	G	17	22	Right-handed alpha
Helix 29	AD2	G	27	34	Right-handed alpha
Helix 30	AD3	G	46	72	Right-handed alpha
Helix 31	AD4	G	79	89	Right-handed alpha
Helix 32	AD5	G	112	116	Right-handed 310
Helix 33	AD6	H	34	46	Right-handed alpha
Helix 34	AD7	H	52	55	Right-handed 310
Helix 35	AD8	H	56	81	Right-handed alpha
Helix 36	AD9	H	89	99	Right-handed alpha
Helix 37	AE1	H	101	121	Right-handed alpha
Helix 38	AE2	M	727	739	Right-handed alpha
Helix 39	AE3	M	820	832	Right-handed alpha
Helix 40	AE4	M	894	907	Right-handed alpha
Helix 41	AE5	M	930	935	Right-handed 310
Helix 42	AE6	N	3	8	Right-handed alpha
Helix 43	AE7	N	355	359	Right-handed 310
Helix 44	AE8	N	427	432	Right-handed alpha
Helix 45	AE9	Q	22	35	Right-handed alpha
Helix 46	AF1	Q	37	41	Right-handed 310
Helix 47	AF2	X	200	211	Right-handed alpha
Helix 48	AF3	X	211	219	Right-handed alpha
Helix 49	AF4	X	221	226	Right-handed 310
Helix 50	AF5	X	294	308	Right-handed alpha
Helix 51	AF6	X	308	313	Right-handed alpha
Helix 52	AF7	X	317	325	Right-handed alpha
Helix 53	AF8	L	194	211	Right-handed alpha
Helix 54	AF9	L	229	237	Right-handed alpha
Helix 55	AG1	L	367	371	Right-handed 310
Helix 56	AG2	L	382	401	Right-handed alpha
Helix 57	AG3	O	86	95	Right-handed alpha
Helix 58	AG4	O	95	107	Right-handed alpha
Helix 59	AG5	O	113	126	Right-handed alpha
Helix 60	AG6	P	80	84	Right-handed 310
Helix 61	AG7	P	86	89	Right-handed 310
Helix 62	AG8	P	90	95	Right-handed alpha
Helix 63	AG9	P	95	104	Right-handed alpha
Helix 64	AH1	P	114	121	Right-handed alpha

There are 35 sheets in PDB entry 6UH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	B	80	81	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	B	45	46	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	G	101	102	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	D	85	86	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	50	51	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	F	45	46	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	H	85	86	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	18	22	first strand
Strand 2	K	322	325	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	31	36	first strand
Strand 2	K	42	47	anti-parallel
Strand 3	K	50	55	anti-parallel
Strand 4	K	60	65	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	76	77	first strand
Strand 2	K	83	87	anti-parallel
Strand 3	K	93	97	anti-parallel
Strand 4	K	101	105	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	116	117	first strand
Strand 2	K	124	128	anti-parallel
Strand 3	K	134	138	anti-parallel
Strand 4	K	143	148	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	157	159	first strand
Strand 2	K	167	171	anti-parallel
Strand 3	K	177	181	anti-parallel
Strand 4	K	187	190	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	206	211	first strand
Strand 2	K	218	222	anti-parallel
Strand 3	K	227	230	anti-parallel
Strand 4	K	237	241	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	258	260	first strand
Strand 2	K	270	272	anti-parallel
Strand 3	K	279	282	anti-parallel
Strand 4	K	289	293	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	305	306	first strand
Strand 2	K	313	314	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	861	864	first strand
Strand 2	M	870	874	anti-parallel
Strand 3	M	968	969	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	885	887	first strand
Strand 2	M	953	960	anti-parallel
Strand 3	M	943	950	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	890	893	first strand
Strand 2	M	921	924	anti-parallel
Strand 3	M	914	918	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	19	24	first strand
Strand 2	N	345	349	anti-parallel
Strand 3	N	334	339	anti-parallel
Strand 4	N	323	329	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	30	35	first strand
Strand 2	N	41	46	anti-parallel
Strand 3	N	51	55	anti-parallel
Strand 4	N	61	65	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	76	81	first strand
Strand 2	N	87	92	anti-parallel
Strand 3	N	97	101	anti-parallel
Strand 4	N	108	110	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	118	123	first strand
Strand 2	N	129	133	anti-parallel
Strand 3	N	140	144	anti-parallel
Strand 4	N	151	155	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	171	174	first strand
Strand 2	N	181	185	anti-parallel
Strand 3	N	191	196	anti-parallel
Strand 4	N	206	210	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	221	224	first strand
Strand 2	N	230	234	anti-parallel
Strand 3	N	240	244	anti-parallel
Strand 4	N	264	268	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	246	247	first strand
Strand 2	N	260	261	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	277	282	first strand
Strand 2	N	289	294	anti-parallel
Strand 3	N	302	306	anti-parallel
Strand 4	N	312	316	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	2	3	first strand
Strand 2	Q	15	16	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	48	50	first strand
Strand 2	Q	43	45	anti-parallel
Strand 3	Q	68	69	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	28	34	first strand
Strand 2	L	37	42	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	52	55	first strand
Strand 2	L	258	262	anti-parallel
Strand 3	L	249	251	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	57	59	first strand
Strand 2	L	68	70	anti-parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	88	90	first strand
Strand 2	L	96	99	anti-parallel
Strand 3	L	361	364	anti-parallel
Strand 4	L	122	124	anti-parallel
Strand 5	L	185	191	anti-parallel
Strand 6	L	289	294	anti-parallel
Strand 7	L	297	301	anti-parallel

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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	88	90	first strand
Strand 2	L	96	99	anti-parallel
Strand 3	L	361	364	anti-parallel
Strand 4	L	122	124	anti-parallel
Strand 5	L	185	191	anti-parallel
Strand 6	L	118	119	anti-parallel
Strand 7	L	380	381	parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	108	114	first strand
Strand 2	L	350	354	anti-parallel
Strand 3	L	137	139	anti-parallel
Strand 4	L	155	158	anti-parallel
Strand 5	L	165	167	anti-parallel
Strand 6	L	170	172	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	271	274	first strand
Strand 2	L	279	282	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UH5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UH5