Analysis of interatomic Contacts of Structural Units in PDB entry:
6UHP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UHP entry

There are 4 chains in PDB entry 6UHP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LEU 65
A
 VAL 69ILE 230
B
 LYS 4LEU 65
B
 VAL 69ILE 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6UHP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed 310
Helix 2
AA2
A
57 62Right-handed 310
Helix 3
AA3
A
69 73Right-handed 310
Helix 4
AA4
A
79 82Right-handed 310
Helix 5
AA5
A
83 88Right-handed alpha
Helix 6
AA6
A
135 140Right-handed alpha
Helix 7
AA7
B
4 10Right-handed 310
Helix 8
AA8
B
38 40Right-handed 310
Helix 9
AA9
B
58 63Right-handed alpha
Helix 10
AB1
B
76 80Right-handed 310
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There are 2 sheets in PDB entry 6UHP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 23first strand
Strand 2
A
26 37anti-parallel
Strand 3
A
42 49anti-parallel
Strand 4
A
218 228anti-parallel
Strand 5
A
200 209anti-parallel
Strand 6
A
149 156anti-parallel
Strand 7
A
161 171anti-parallel
Strand 8
A
177 188anti-parallel
Strand 9
A
93 100anti-parallel
Strand 10
A
106 114anti-parallel
Strand 11
A
120 129anti-parallel
Strand 12
A
12 23parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 156first strand
Strand 2
B
161 171anti-parallel
Strand 3
B
177 188anti-parallel
Strand 4
B
93 101anti-parallel
Strand 5
B
106 116anti-parallel
Strand 6
B
119 129anti-parallel
Strand 7
B
13 23parallel
Strand 8
B
26 37anti-parallel
Strand 9
B
42 49anti-parallel
Strand 10
B
218 228anti-parallel
Strand 11
B
201 209anti-parallel
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