Analysis of interatomic Contacts of Structural Units in PDB entry:
6UI3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UI3 entry

There is 1 chain in PDB entry 6UI3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 4ASN 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 6UI3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
15 22Right-handed alpha
Helix 2
AA2
A
48 59Right-handed alpha
Helix 3
AA3
A
81 97Right-handed alpha
Helix 4
AA4
A
109 114Right-handed 310
Helix 5
AA5
A
116 118Right-handed 310
Helix 6
AA6
A
119 138Right-handed alpha
Helix 7
AA7
A
162 183Right-handed alpha
Helix 8
AA8
A
184 189Right-handed 310
Helix 9
AA9
A
197 200Right-handed 310
Helix 10
AB1
A
202 209Right-handed alpha
Helix 11
AB2
A
226 231Right-handed alpha
Helix 12
AB3
A
242 260Right-handed alpha
Helix 13
AB4
A
261 264Right-handed 310
Helix 14
AB5
A
279 297Right-handed alpha
Helix 15
AB6
A
328 340Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6UI3.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
25 29first strand
Strand 2
A
62 65parallel
Strand 3
A
101 105parallel
Strand 4
A
145 148parallel
Strand 5
A
192 195parallel
Strand 6
A
217 222parallel
Strand 7
A
267 272parallel
Strand 8
A
301 305parallel
Strand 9
A
25 29parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il