Analysis of interatomic Contacts of Structural Units in PDB entry:
6UI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UI4 entry

There are 2 chains in PDB entry 6UI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 37ALA 728
B
 VAL 9MET 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6UI4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
50 64Right-handed alpha
Helix 3
AA3
A
88 96Right-handed alpha
Helix 4
AA4
A
106 122Right-handed alpha
Helix 5
AA5
A
136 152Right-handed alpha
Helix 6
AA6
A
156 177Right-handed alpha
Helix 7
AA7
A
215 221Right-handed 310
Helix 8
AA8
A
229 239Right-handed alpha
Helix 9
AA9
A
240 247Right-handed alpha
Helix 10
AB1
A
251 254Right-handed 310
Helix 11
AB2
A
255 260Right-handed alpha
Helix 12
AB3
A
270 286Right-handed alpha
Helix 13
AB4
A
288 307Right-handed alpha
Helix 14
AB5
A
322 334Right-handed alpha
Helix 15
AB6
A
336 345Right-handed alpha
Helix 16
AB7
A
362 393Right-handed alpha
Helix 17
AB8
A
418 440Right-handed alpha
Helix 18
AB9
A
440 450Right-handed alpha
Helix 19
AC1
A
462 471Right-handed alpha
Helix 20
AC2
A
476 487Right-handed alpha
Helix 21
AC3
A
491 506Right-handed alpha
Helix 22
AC4
A
533 539Right-handed alpha
Helix 23
AC5
A
543 552Right-handed alpha
Helix 24
AC6
A
555 562Right-handed alpha
Helix 25
AC7
A
563 568Right-handed 310
Helix 26
AC8
A
576 593Right-handed alpha
Helix 27
AC9
A
615 627Right-handed alpha
Helix 28
AD1
A
627 638Right-handed alpha
Helix 29
AD2
A
645 653Right-handed alpha
Helix 30
AD3
A
654 656Right-handed 310
Helix 31
AD4
A
670 683Right-handed alpha
Helix 32
AD5
A
685 687Right-handed 310
Helix 33
AD6
A
700 713Right-handed alpha
Helix 34
AD7
A
713 722Right-handed alpha
Helix 35
AD8
B
10 18Right-handed alpha
Helix 36
AD9
B
29 40Right-handed alpha
Helix 37
AE1
B
46 53Right-handed alpha
Helix 38
AE2
B
64 76Right-handed alpha
Helix 39
AE3
B
82 93Right-handed alpha
Helix 40
AE4
B
102 112Right-handed alpha
Helix 41
AE5
B
118 129Right-handed alpha
Helix 42
AE6
B
138 146Right-handed alpha
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There are 9 sheets in PDB entry 6UI4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 71first strand
Strand 2
A
74 78anti-parallel
Strand 3
A
596 603parallel
Strand 4
A
125 130parallel
Strand 5
A
401 407parallel
Strand 6
A
192 198anti-parallel
Strand 7
A
204 211anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
184 188anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 312first strand
Strand 2
A
318 320anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 349first strand
Strand 2
A
357 360anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 514first strand
Strand 2
A
517 522anti-parallel
Strand 3
A
525 530anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 644first strand
Strand 2
A
695 698anti-parallel
Strand 3
A
689 691anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 661first strand
Strand 2
A
664 665anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
62 63anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 101first strand
Strand 2
B
135 137anti-parallel
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