Analysis of interatomic Contacts of Structural Units in PDB entry:
6UI5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UI5 entry

There are 2 chains in PDB entry 6UI5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 3	THR 499
B	GLU 3	THR 499

There are 28 helices in PDB entry 6UI5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	23	Right-handed alpha
Helix 2	AA2	A	47	56	Right-handed alpha
Helix 3	AA3	A	81	85	Right-handed 310
Helix 4	AA4	A	96	111	Right-handed alpha
Helix 5	AA5	A	159	165	Right-handed alpha
Helix 6	AA6	A	237	250	Right-handed alpha
Helix 7	AA7	A	283	285	Right-handed 310
Helix 8	AA8	A	294	316	Right-handed alpha
Helix 9	AA9	A	324	347	Right-handed alpha
Helix 10	AB1	A	351	366	Right-handed alpha
Helix 11	AB2	A	368	380	Right-handed alpha
Helix 12	AB3	A	422	428	Right-handed 310
Helix 13	AB4	A	446	449	Right-handed 310
Helix 14	AB5	A	483	496	Right-handed alpha
Helix 15	AB6	B	11	23	Right-handed alpha
Helix 16	AB7	B	47	56	Right-handed alpha
Helix 17	AB8	B	81	85	Right-handed 310
Helix 18	AB9	B	96	112	Right-handed alpha
Helix 19	AC1	B	159	165	Right-handed alpha
Helix 20	AC2	B	237	250	Right-handed alpha
Helix 21	AC3	B	283	285	Right-handed 310
Helix 22	AC4	B	294	316	Right-handed alpha
Helix 23	AC5	B	322	347	Right-handed alpha
Helix 24	AC6	B	351	366	Right-handed alpha
Helix 25	AC7	B	368	380	Right-handed alpha
Helix 26	AC8	B	422	426	Right-handed 310
Helix 27	AC9	B	444	448	Right-handed 310
Helix 28	AD1	B	483	496	Right-handed alpha

There are 16 sheets in PDB entry 6UI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	28	31	parallel
Strand 3	A	5	8	parallel
Strand 4	A	150	153	parallel
Strand 5	A	279	281	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	92	93	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	75	first strand
Strand 2	A	78	80	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	126	first strand
Strand 2	A	133	138	anti-parallel
Strand 3	A	143	148	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	269	271	anti-parallel
Strand 3	A	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	211	first strand
Strand 2	A	216	225	anti-parallel
Strand 3	A	176	185	anti-parallel
Strand 4	A	257	266	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	411	414	first strand
Strand 2	A	417	420	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	455	first strand
Strand 2	A	430	434	parallel
Strand 3	A	465	468	anti-parallel
Strand 4	A	474	477	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	116	first strand
Strand 2	B	28	31	parallel
Strand 3	B	5	8	parallel
Strand 4	B	150	153	parallel
Strand 5	B	279	281	parallel
Strand 6	B	275	276	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	92	93	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	75	first strand
Strand 2	B	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	126	first strand
Strand 2	B	133	138	anti-parallel
Strand 3	B	144	148	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	171	first strand
Strand 2	B	269	271	anti-parallel
Strand 3	B	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	206	213	anti-parallel
Strand 3	B	216	225	anti-parallel
Strand 4	B	176	184	anti-parallel
Strand 5	B	258	265	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	413	first strand
Strand 2	B	418	420	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	455	first strand
Strand 2	B	430	434	parallel
Strand 3	B	465	468	anti-parallel
Strand 4	B	474	477	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UI5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UI5