Analysis of interatomic Contacts of Structural Units in PDB entry:
6UIA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UIA entry

There are 4 chains in PDB entry 6UIA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	SER 2	MET 1099
D	SER 2	MET 1099
A	SER 2	MET 1099
B	SER 2	MET 1099

There are157 helices in PDB entry 6UIA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	7	19	Right-handed alpha
Helix 2	AA2	C	39	47	Right-handed alpha
Helix 3	AA3	C	48	52	Right-handed 310
Helix 4	AA4	C	77	86	Right-handed alpha
Helix 5	AA5	C	139	143	Right-handed 310
Helix 6	AA6	C	161	169	Right-handed alpha
Helix 7	AA7	C	174	176	Right-handed 310
Helix 8	AA8	C	177	194	Right-handed alpha
Helix 9	AA9	C	225	234	Right-handed alpha
Helix 10	AB1	C	247	260	Right-handed alpha
Helix 11	AB2	C	281	295	Right-handed alpha
Helix 12	AB3	C	312	327	Right-handed alpha
Helix 13	AB4	C	349	362	Right-handed alpha
Helix 14	AB5	C	364	371	Right-handed alpha
Helix 15	AB6	C	383	399	Right-handed alpha
Helix 16	AB7	C	412	419	Right-handed alpha
Helix 17	AB8	C	505	519	Right-handed alpha
Helix 18	AB9	C	555	563	Right-handed alpha
Helix 19	AC1	C	577	587	Right-handed alpha
Helix 20	AC2	C	602	617	Right-handed alpha
Helix 21	AC3	C	642	649	Right-handed alpha
Helix 22	AC4	C	664	678	Right-handed alpha
Helix 23	AC5	C	696	707	Right-handed alpha
Helix 24	AC6	C	723	733	Right-handed alpha
Helix 25	AC7	C	771	781	Right-handed alpha
Helix 26	AC8	C	790	805	Right-handed alpha
Helix 27	AC9	C	824	831	Right-handed alpha
Helix 28	AD1	C	858	865	Right-handed alpha
Helix 29	AD2	C	868	877	Right-handed alpha
Helix 30	AD3	C	883	897	Right-handed alpha
Helix 31	AD4	C	904	916	Right-handed alpha
Helix 32	AD5	C	919	929	Right-handed alpha
Helix 33	AD6	C	937	951	Right-handed alpha
Helix 34	AD7	C	955	965	Right-handed alpha
Helix 35	AD8	C	985	997	Right-handed alpha
Helix 36	AD9	C	1001	1015	Right-handed alpha
Helix 37	AE1	C	1024	1040	Right-handed alpha
Helix 38	AE2	C	1045	1055	Right-handed alpha
Helix 39	AE3	C	1057	1079	Right-handed alpha
Helix 40	AE4	D	7	18	Right-handed alpha
Helix 41	AE5	D	41	46	Right-handed alpha
Helix 42	AE6	D	47	51	Right-handed 310
Helix 43	AE7	D	78	86	Right-handed alpha
Helix 44	AE8	D	144	149	Right-handed alpha
Helix 45	AE9	D	161	169	Right-handed alpha
Helix 46	AF1	D	174	176	Right-handed 310
Helix 47	AF2	D	177	194	Right-handed alpha
Helix 48	AF3	D	225	234	Right-handed alpha
Helix 49	AF4	D	247	260	Right-handed alpha
Helix 50	AF5	D	281	295	Right-handed alpha
Helix 51	AF6	D	312	327	Right-handed alpha
Helix 52	AF7	D	349	362	Right-handed alpha
Helix 53	AF8	D	364	371	Right-handed alpha
Helix 54	AF9	D	384	399	Right-handed alpha
Helix 55	AG1	D	410	412	Right-handed 310
Helix 56	AG2	D	413	419	Right-handed alpha
Helix 57	AG3	D	505	519	Right-handed alpha
Helix 58	AG4	D	555	563	Right-handed alpha
Helix 59	AG5	D	577	587	Right-handed alpha
Helix 60	AG6	D	602	617	Right-handed alpha
Helix 61	AG7	D	642	649	Right-handed alpha
Helix 62	AG8	D	664	677	Right-handed alpha
Helix 63	AG9	D	697	707	Right-handed alpha
Helix 64	AH1	D	724	733	Right-handed alpha
Helix 65	AH2	D	771	781	Right-handed alpha
Helix 66	AH3	D	791	807	Right-handed alpha
Helix 67	AH4	D	824	831	Right-handed alpha
Helix 68	AH5	D	858	866	Right-handed alpha
Helix 69	AH6	D	868	877	Right-handed alpha
Helix 70	AH7	D	883	897	Right-handed alpha
Helix 71	AH8	D	904	916	Right-handed alpha
Helix 72	AH9	D	919	929	Right-handed alpha
Helix 73	AI1	D	937	952	Right-handed alpha
Helix 74	AI2	D	955	963	Right-handed alpha
Helix 75	AI3	D	986	995	Right-handed alpha
Helix 76	AI4	D	1001	1018	Right-handed alpha
Helix 77	AI5	D	1024	1040	Right-handed alpha
Helix 78	AI6	D	1047	1055	Right-handed alpha
Helix 79	AI7	D	1057	1079	Right-handed alpha
Helix 80	AI8	A	7	18	Right-handed alpha
Helix 81	AI9	A	40	47	Right-handed alpha
Helix 82	AJ1	A	48	52	Right-handed 310
Helix 83	AJ2	A	77	89	Right-handed alpha
Helix 84	AJ3	A	139	143	Right-handed 310
Helix 85	AJ4	A	161	169	Right-handed alpha
Helix 86	AJ5	A	177	190	Right-handed alpha
Helix 87	AJ6	A	191	196	Right-handed 310
Helix 88	AJ7	A	224	228	Right-handed 310
Helix 89	AJ8	A	248	260	Right-handed alpha
Helix 90	AJ9	A	282	294	Right-handed alpha
Helix 91	AK1	A	312	323	Right-handed alpha
Helix 92	AK2	A	352	362	Right-handed alpha
Helix 93	AK3	A	384	398	Right-handed alpha
Helix 94	AK4	A	505	519	Right-handed alpha
Helix 95	AK5	A	555	563	Right-handed alpha
Helix 96	AK6	A	579	587	Right-handed alpha
Helix 97	AK7	A	604	616	Right-handed alpha
Helix 98	AK8	A	643	648	Right-handed alpha
Helix 99	AK9	A	664	677	Right-handed alpha
Helix 100	AL1	A	697	706	Right-handed alpha
Helix 101	AL2	A	723	732	Right-handed alpha
Helix 102	AL3	A	771	781	Right-handed alpha
Helix 103	AL4	A	790	807	Right-handed alpha
Helix 104	AL5	A	824	831	Right-handed alpha
Helix 105	AL6	A	858	865	Right-handed alpha
Helix 106	AL7	A	868	877	Right-handed alpha
Helix 107	AL8	A	883	897	Right-handed alpha
Helix 108	AL9	A	904	916	Right-handed alpha
Helix 109	AM1	A	919	929	Right-handed alpha
Helix 110	AM2	A	937	951	Right-handed alpha
Helix 111	AM3	A	955	966	Right-handed alpha
Helix 112	AM4	A	986	995	Right-handed alpha
Helix 113	AM5	A	1001	1015	Right-handed alpha
Helix 114	AM6	A	1024	1040	Right-handed alpha
Helix 115	AM7	A	1047	1055	Right-handed alpha
Helix 116	AM8	A	1057	1079	Right-handed alpha
Helix 117	AM9	B	7	15	Right-handed alpha
Helix 118	AN1	B	41	46	Right-handed alpha
Helix 119	AN2	B	47	52	Right-handed 310
Helix 120	AN3	B	77	86	Right-handed alpha
Helix 121	AN4	B	139	143	Right-handed 310
Helix 122	AN5	B	144	148	Right-handed 310
Helix 123	AN6	B	161	169	Right-handed alpha
Helix 124	AN7	B	174	178	Right-handed 310
Helix 125	AN8	B	180	194	Right-handed alpha
Helix 126	AN9	B	225	230	Right-handed alpha
Helix 127	AO1	B	247	260	Right-handed alpha
Helix 128	AO2	B	281	293	Right-handed alpha
Helix 129	AO3	B	312	327	Right-handed alpha
Helix 130	AO4	B	349	362	Right-handed alpha
Helix 131	AO5	B	364	372	Right-handed alpha
Helix 132	AO6	B	383	399	Right-handed alpha
Helix 133	AO7	B	410	412	Right-handed 310
Helix 134	AO8	B	413	419	Right-handed alpha
Helix 135	AO9	B	505	519	Right-handed alpha
Helix 136	AP1	B	555	563	Right-handed alpha
Helix 137	AP2	B	574	587	Right-handed alpha
Helix 138	AP3	B	602	617	Right-handed alpha
Helix 139	AP4	B	642	649	Right-handed alpha
Helix 140	AP5	B	663	677	Right-handed alpha
Helix 141	AP6	B	696	705	Right-handed alpha
Helix 142	AP7	B	723	732	Right-handed alpha
Helix 143	AP8	B	771	781	Right-handed alpha
Helix 144	AP9	B	790	807	Right-handed alpha
Helix 145	AQ1	B	824	832	Right-handed alpha
Helix 146	AQ2	B	858	866	Right-handed alpha
Helix 147	AQ3	B	868	877	Right-handed alpha
Helix 148	AQ4	B	885	897	Right-handed alpha
Helix 149	AQ5	B	904	916	Right-handed alpha
Helix 150	AQ6	B	919	929	Right-handed alpha
Helix 151	AQ7	B	937	951	Right-handed alpha
Helix 152	AQ8	B	955	965	Right-handed alpha
Helix 153	AQ9	B	986	997	Right-handed alpha
Helix 154	AR1	B	1001	1015	Right-handed alpha
Helix 155	AR2	B	1024	1040	Right-handed alpha
Helix 156	AR3	B	1045	1055	Right-handed alpha
Helix 157	AR4	B	1057	1079	Right-handed alpha

There are 30 sheets in PDB entry 6UIA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	5	first strand
Strand 2	C	217	222	anti-parallel
Strand 3	C	197	207	anti-parallel
Strand 4	C	118	125	anti-parallel
Strand 5	C	129	135	anti-parallel
Strand 6	C	150	155	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	5	first strand
Strand 2	C	217	222	anti-parallel
Strand 3	C	197	207	anti-parallel
Strand 4	C	212	214	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	34	first strand
Strand 2	C	105	109	anti-parallel
Strand 3	C	55	58	anti-parallel
Strand 4	C	73	76	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	95	first strand
Strand 2	C	98	100	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	268	first strand
Strand 2	C	303	308	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	277	first strand
Strand 2	C	336	340	parallel
Strand 3	C	373	378	parallel
Strand 4	C	402	405	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	543	first strand
Strand 2	C	546	553	anti-parallel
Strand 3	C	526	530	parallel
Strand 4	C	498	502	parallel
Strand 5	C	566	571	parallel
Strand 6	C	593	596	parallel
Strand 7	C	619	620	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	634	635	first strand
Strand 2	C	628	630	anti-parallel
Strand 3	C	681	686	anti-parallel
Strand 4	C	657	661	parallel
Strand 5	C	712	718	parallel
Strand 6	C	740	745	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	34	first strand
Strand 2	D	105	109	anti-parallel
Strand 3	D	55	56	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	155	first strand
Strand 2	D	129	135	anti-parallel
Strand 3	D	118	125	anti-parallel
Strand 4	D	197	207	anti-parallel
Strand 5	D	212	214	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	155	first strand
Strand 2	D	129	135	anti-parallel
Strand 3	D	118	125	anti-parallel
Strand 4	D	197	207	anti-parallel
Strand 5	D	218	221	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	268	first strand
Strand 2	D	303	308	anti-parallel
Strand 3	D	275	280	parallel
Strand 4	D	336	340	parallel
Strand 5	D	373	377	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	537	543	first strand
Strand 2	D	546	553	anti-parallel
Strand 3	D	526	530	parallel
Strand 4	D	498	502	parallel
Strand 5	D	566	571	parallel
Strand 6	D	593	596	parallel
Strand 7	D	619	620	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	634	635	first strand
Strand 2	D	627	630	anti-parallel
Strand 3	D	681	686	anti-parallel
Strand 4	D	657	661	parallel
Strand 5	D	712	717	parallel
Strand 6	D	740	744	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	34	first strand
Strand 2	A	105	108	anti-parallel
Strand 3	A	56	59	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	95	first strand
Strand 2	A	98	100	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	124	first strand
Strand 2	A	130	135	anti-parallel
Strand 3	A	150	154	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	201	first strand
Strand 2	A	218	220	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	268	first strand
Strand 2	A	303	308	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	337	339	parallel
Strand 3	A	375	376	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	502	first strand
Strand 2	A	568	571	parallel
Strand 3	A	593	596	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	543	first strand
Strand 2	A	546	552	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	686	first strand
Strand 2	A	657	661	parallel
Strand 3	A	712	717	parallel
Strand 4	A	740	744	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	34	first strand
Strand 2	B	105	108	anti-parallel
Strand 3	B	56	59	anti-parallel
Strand 4	B	73	74	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	95	first strand
Strand 2	B	98	100	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	155	first strand
Strand 2	B	129	135	anti-parallel
Strand 3	B	118	125	anti-parallel
Strand 4	B	197	207	anti-parallel
Strand 5	B	212	214	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	155	first strand
Strand 2	B	129	135	anti-parallel
Strand 3	B	118	125	anti-parallel
Strand 4	B	197	207	anti-parallel
Strand 5	B	218	221	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	268	first strand
Strand 2	B	303	308	anti-parallel
Strand 3	B	275	280	parallel
Strand 4	B	336	342	parallel
Strand 5	B	373	378	parallel
Strand 6	B	402	405	parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	543	first strand
Strand 2	B	546	553	anti-parallel
Strand 3	B	526	530	parallel
Strand 4	B	499	502	parallel
Strand 5	B	568	571	parallel
Strand 6	B	593	596	parallel
Strand 7	B	619	620	parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	635	first strand
Strand 2	B	627	630	anti-parallel
Strand 3	B	681	686	anti-parallel
Strand 4	B	657	661	parallel
Strand 5	B	712	718	parallel
Strand 6	B	740	745	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UIA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UIA