Analysis of interatomic Contacts of Structural Units in PDB entry:
6UIV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UIV entry

There are 11 chains in PDB entry 6UIV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 20	LEU 306
B	ASP 20	LEU 306
C	ASP 20	LEU 306
D	ASP 20	LEU 306
E	ASP 20	LEU 306
F	ASP 20	LEU 306
G	ASP 20	LEU 306
H	ASP 20	LEU 306
I	ASP 20	LEU 306
J	ASP 20	LEU 306
K	ASP 20	LEU 306

There are165 helices in PDB entry 6UIV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	38	Right-handed alpha
Helix 2	AA2	A	52	75	Right-handed alpha
Helix 3	AA3	A	77	89	Right-handed alpha
Helix 4	AA4	A	97	124	Right-handed alpha
Helix 5	AA5	A	125	133	Right-handed alpha
Helix 6	AA6	A	134	136	Right-handed 310
Helix 7	AA7	A	149	151	Right-handed 310
Helix 8	AA8	A	152	159	Right-handed alpha
Helix 9	AA9	A	160	163	Right-handed 310
Helix 10	AB1	A	166	168	Right-handed 310
Helix 11	AB2	A	169	209	Right-handed alpha
Helix 12	AB3	A	214	251	Right-handed alpha
Helix 13	AB4	A	257	267	Right-handed alpha
Helix 14	AB5	A	274	282	Right-handed alpha
Helix 15	AB6	A	297	306	Right-handed alpha
Helix 16	AB7	B	21	38	Right-handed alpha
Helix 17	AB8	B	52	75	Right-handed alpha
Helix 18	AB9	B	77	89	Right-handed alpha
Helix 19	AC1	B	97	124	Right-handed alpha
Helix 20	AC2	B	125	133	Right-handed alpha
Helix 21	AC3	B	134	136	Right-handed 310
Helix 22	AC4	B	149	151	Right-handed 310
Helix 23	AC5	B	152	159	Right-handed alpha
Helix 24	AC6	B	160	163	Right-handed 310
Helix 25	AC7	B	166	168	Right-handed 310
Helix 26	AC8	B	169	209	Right-handed alpha
Helix 27	AC9	B	214	251	Right-handed alpha
Helix 28	AD1	B	257	267	Right-handed alpha
Helix 29	AD2	B	274	282	Right-handed alpha
Helix 30	AD3	B	297	306	Right-handed alpha
Helix 31	AD4	C	21	38	Right-handed alpha
Helix 32	AD5	C	52	75	Right-handed alpha
Helix 33	AD6	C	77	89	Right-handed alpha
Helix 34	AD7	C	97	124	Right-handed alpha
Helix 35	AD8	C	125	133	Right-handed alpha
Helix 36	AD9	C	134	136	Right-handed 310
Helix 37	AE1	C	149	151	Right-handed 310
Helix 38	AE2	C	152	159	Right-handed alpha
Helix 39	AE3	C	160	163	Right-handed 310
Helix 40	AE4	C	166	168	Right-handed 310
Helix 41	AE5	C	169	209	Right-handed alpha
Helix 42	AE6	C	214	251	Right-handed alpha
Helix 43	AE7	C	257	267	Right-handed alpha
Helix 44	AE8	C	274	282	Right-handed alpha
Helix 45	AE9	C	297	306	Right-handed alpha
Helix 46	AF1	D	21	38	Right-handed alpha
Helix 47	AF2	D	52	75	Right-handed alpha
Helix 48	AF3	D	77	89	Right-handed alpha
Helix 49	AF4	D	97	124	Right-handed alpha
Helix 50	AF5	D	125	133	Right-handed alpha
Helix 51	AF6	D	134	136	Right-handed 310
Helix 52	AF7	D	149	151	Right-handed 310
Helix 53	AF8	D	152	159	Right-handed alpha
Helix 54	AF9	D	160	163	Right-handed 310
Helix 55	AG1	D	166	168	Right-handed 310
Helix 56	AG2	D	169	209	Right-handed alpha
Helix 57	AG3	D	214	251	Right-handed alpha
Helix 58	AG4	D	257	267	Right-handed alpha
Helix 59	AG5	D	274	282	Right-handed alpha
Helix 60	AG6	D	297	306	Right-handed alpha
Helix 61	AG7	E	21	38	Right-handed alpha
Helix 62	AG8	E	52	75	Right-handed alpha
Helix 63	AG9	E	77	89	Right-handed alpha
Helix 64	AH1	E	97	124	Right-handed alpha
Helix 65	AH2	E	125	133	Right-handed alpha
Helix 66	AH3	E	134	136	Right-handed 310
Helix 67	AH4	E	149	151	Right-handed 310
Helix 68	AH5	E	152	159	Right-handed alpha
Helix 69	AH6	E	160	163	Right-handed 310
Helix 70	AH7	E	166	168	Right-handed 310
Helix 71	AH8	E	169	209	Right-handed alpha
Helix 72	AH9	E	214	251	Right-handed alpha
Helix 73	AI1	E	257	267	Right-handed alpha
Helix 74	AI2	E	274	282	Right-handed alpha
Helix 75	AI3	E	297	306	Right-handed alpha
Helix 76	AI4	F	21	38	Right-handed alpha
Helix 77	AI5	F	52	75	Right-handed alpha
Helix 78	AI6	F	77	89	Right-handed alpha
Helix 79	AI7	F	97	124	Right-handed alpha
Helix 80	AI8	F	125	133	Right-handed alpha
Helix 81	AI9	F	134	136	Right-handed 310
Helix 82	AJ1	F	149	151	Right-handed 310
Helix 83	AJ2	F	152	159	Right-handed alpha
Helix 84	AJ3	F	160	163	Right-handed 310
Helix 85	AJ4	F	166	168	Right-handed 310
Helix 86	AJ5	F	169	209	Right-handed alpha
Helix 87	AJ6	F	214	251	Right-handed alpha
Helix 88	AJ7	F	257	267	Right-handed alpha
Helix 89	AJ8	F	274	282	Right-handed alpha
Helix 90	AJ9	F	297	306	Right-handed alpha
Helix 91	AK1	G	21	38	Right-handed alpha
Helix 92	AK2	G	52	75	Right-handed alpha
Helix 93	AK3	G	77	89	Right-handed alpha
Helix 94	AK4	G	97	124	Right-handed alpha
Helix 95	AK5	G	125	133	Right-handed alpha
Helix 96	AK6	G	134	136	Right-handed 310
Helix 97	AK7	G	149	151	Right-handed 310
Helix 98	AK8	G	152	159	Right-handed alpha
Helix 99	AK9	G	160	163	Right-handed 310
Helix 100	AL1	G	166	168	Right-handed 310
Helix 101	AL2	G	169	209	Right-handed alpha
Helix 102	AL3	G	214	251	Right-handed alpha
Helix 103	AL4	G	257	267	Right-handed alpha
Helix 104	AL5	G	274	282	Right-handed alpha
Helix 105	AL6	G	297	306	Right-handed alpha
Helix 106	AL7	H	21	38	Right-handed alpha
Helix 107	AL8	H	52	75	Right-handed alpha
Helix 108	AL9	H	77	89	Right-handed alpha
Helix 109	AM1	H	97	124	Right-handed alpha
Helix 110	AM2	H	125	133	Right-handed alpha
Helix 111	AM3	H	134	136	Right-handed 310
Helix 112	AM4	H	149	151	Right-handed 310
Helix 113	AM5	H	152	159	Right-handed alpha
Helix 114	AM6	H	160	163	Right-handed 310
Helix 115	AM7	H	166	168	Right-handed 310
Helix 116	AM8	H	169	209	Right-handed alpha
Helix 117	AM9	H	214	251	Right-handed alpha
Helix 118	AN1	H	257	267	Right-handed alpha
Helix 119	AN2	H	274	282	Right-handed alpha
Helix 120	AN3	H	297	306	Right-handed alpha
Helix 121	AN4	I	21	38	Right-handed alpha
Helix 122	AN5	I	52	75	Right-handed alpha
Helix 123	AN6	I	77	89	Right-handed alpha
Helix 124	AN7	I	97	124	Right-handed alpha
Helix 125	AN8	I	125	133	Right-handed alpha
Helix 126	AN9	I	134	136	Right-handed 310
Helix 127	AO1	I	149	151	Right-handed 310
Helix 128	AO2	I	152	159	Right-handed alpha
Helix 129	AO3	I	160	163	Right-handed 310
Helix 130	AO4	I	166	168	Right-handed 310
Helix 131	AO5	I	169	209	Right-handed alpha
Helix 132	AO6	I	214	251	Right-handed alpha
Helix 133	AO7	I	257	267	Right-handed alpha
Helix 134	AO8	I	274	282	Right-handed alpha
Helix 135	AO9	I	297	306	Right-handed alpha
Helix 136	AP1	J	21	38	Right-handed alpha
Helix 137	AP2	J	52	75	Right-handed alpha
Helix 138	AP3	J	77	89	Right-handed alpha
Helix 139	AP4	J	97	124	Right-handed alpha
Helix 140	AP5	J	125	133	Right-handed alpha
Helix 141	AP6	J	134	136	Right-handed 310
Helix 142	AP7	J	149	151	Right-handed 310
Helix 143	AP8	J	152	159	Right-handed alpha
Helix 144	AP9	J	160	163	Right-handed 310
Helix 145	AQ1	J	166	168	Right-handed 310
Helix 146	AQ2	J	169	209	Right-handed alpha
Helix 147	AQ3	J	214	251	Right-handed alpha
Helix 148	AQ4	J	257	267	Right-handed alpha
Helix 149	AQ5	J	274	282	Right-handed alpha
Helix 150	AQ6	J	297	306	Right-handed alpha
Helix 151	AQ7	K	21	38	Right-handed alpha
Helix 152	AQ8	K	52	75	Right-handed alpha
Helix 153	AQ9	K	77	89	Right-handed alpha
Helix 154	AR1	K	97	124	Right-handed alpha
Helix 155	AR2	K	125	133	Right-handed alpha
Helix 156	AR3	K	134	136	Right-handed 310
Helix 157	AR4	K	149	151	Right-handed 310
Helix 158	AR5	K	152	159	Right-handed alpha
Helix 159	AR6	K	160	163	Right-handed 310
Helix 160	AR7	K	166	168	Right-handed 310
Helix 161	AR8	K	169	209	Right-handed alpha
Helix 162	AR9	K	214	251	Right-handed alpha
Helix 163	AS1	K	257	267	Right-handed alpha
Helix 164	AS2	K	274	282	Right-handed alpha
Helix 165	AS3	K	297	306	Right-handed alpha

There are 11 sheets in PDB entry 6UIV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	290	first strand
Strand 2	A	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	290	first strand
Strand 2	B	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	290	first strand
Strand 2	C	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	289	290	first strand
Strand 2	D	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	289	290	first strand
Strand 2	E	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	289	290	first strand
Strand 2	F	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	289	290	first strand
Strand 2	G	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	289	290	first strand
Strand 2	H	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	289	290	first strand
Strand 2	I	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	289	290	first strand
Strand 2	J	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	289	290	first strand
Strand 2	K	293	294	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UIV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UIV