Analysis of interatomic Contacts of Structural Units in PDB entry:
6UJF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UJF entry

There is 1 chain in PDB entry 6UJF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 39GLU 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6UJF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 73Right-handed alpha
Helix 2
AA2
A
83 88Right-handed 310
Helix 3
AA3
A
97 113Right-handed alpha
Helix 4
AA4
A
125 131Right-handed alpha
Helix 5
AA5
A
131 150Right-handed alpha
Helix 6
AA6
A
170 189Right-handed alpha
Helix 7
AA7
A
198 203Right-handed alpha
Helix 8
AA8
A
204 210Right-handed 310
Helix 9
AA9
A
227 233Right-handed alpha
Helix 10
AB1
A
252 274Right-handed alpha
Helix 11
AB2
A
289 307Right-handed alpha
Helix 12
AB3
A
331 339Right-handed alpha
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There are 2 sheets in PDB entry 6UJF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
77 82parallel
Strand 3
A
117 122parallel
Strand 4
A
157 160parallel
Strand 5
A
194 196parallel
Strand 6
A
218 223parallel
Strand 7
A
276 282parallel
Strand 8
A
310 313parallel
Strand 9
A
42 45parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
329 330anti-parallel
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