Analysis of interatomic Contacts of Structural Units in PDB entry:
6UK5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UK5 entry

There are 2 chains in PDB entry 6UK5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3THR 236
B
 HIS -8THR 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6UK5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 17Right-handed alpha
Helix 2
AA2
A
20 36Right-handed alpha
Helix 3
AA3
A
50 58Right-handed alpha
Helix 4
AA4
A
69 80Right-handed alpha
Helix 5
AA5
A
108 112Right-handed 310
Helix 6
AA6
A
114 128Right-handed alpha
Helix 7
AA7
A
203 214Right-handed alpha
Helix 8
AA8
B
10 18Right-handed alpha
Helix 9
AA9
B
20 36Right-handed alpha
Helix 10
AB1
B
50 58Right-handed alpha
Helix 11
AB2
B
69 80Right-handed alpha
Helix 12
AB3
B
107 112Right-handed 310
Helix 13
AB4
B
114 128Right-handed alpha
Helix 14
AB5
B
203 214Right-handed alpha
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There are 6 sheets in PDB entry 6UK5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-2 0first strand
Strand 2
A
190 200parallel
Strand 3
A
175 186anti-parallel
Strand 4
A
161 172anti-parallel
Strand 5
A
149 158anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
62 67parallel
Strand 3
A
41 45parallel
Strand 4
A
99 104parallel
Strand 5
A
129 137parallel
Strand 6
A
230 235anti-parallel
Strand 7
A
216 217anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
62 67parallel
Strand 3
A
41 45parallel
Strand 4
A
99 104parallel
Strand 5
A
129 137parallel
Strand 6
A
230 235anti-parallel
Strand 7
A
220 221anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 87first strand
Strand 2
B
62 67parallel
Strand 3
B
41 45parallel
Strand 4
B
99 104parallel
Strand 5
B
129 137parallel
Strand 6
B
230 235anti-parallel
Strand 7
B
216 217anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 87first strand
Strand 2
B
62 67parallel
Strand 3
B
41 45parallel
Strand 4
B
99 104parallel
Strand 5
B
129 137parallel
Strand 6
B
230 235anti-parallel
Strand 7
B
220 221anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 158first strand
Strand 2
B
161 172anti-parallel
Strand 3
B
175 186anti-parallel
Strand 4
B
190 200anti-parallel
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