Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ULC entry

There are 8 chains in PDB entry 6ULC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 32	GLU 507
B	GLY 521	ASP 664
C	GLU 32	GLU 507
D	GLY 521	ASP 664
E	GLU 32	GLU 507
F	GLY 521	ASP 664
H	GLN 1	CYS 216
L	GLN 1	SER 210

There are 56 helices in PDB entry 6ULC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	62	Right-handed alpha
Helix 2	AA2	A	99	117	Right-handed alpha
Helix 3	AA3	A	123	127	Right-handed 310
Helix 4	AA4	A	194	199	Right-handed alpha
Helix 5	AA5	A	335	349	Right-handed alpha
Helix 6	AA6	A	368	373	Right-handed alpha
Helix 7	AA7	A	404	408	Right-handed 310
Helix 8	AA8	A	425	429	Right-handed 310
Helix 9	AA9	A	476	481	Right-handed alpha
Helix 10	AB1	A	482	484	Right-handed 310
Helix 11	AB2	B	530	536	Right-handed alpha
Helix 12	AB3	B	536	545	Right-handed alpha
Helix 13	AB4	B	546	553	Right-handed alpha
Helix 14	AB5	B	569	596	Right-handed alpha
Helix 15	AB6	B	618	626	Right-handed alpha
Helix 16	AB7	B	628	635	Right-handed alpha
Helix 17	AB8	B	635	649	Right-handed alpha
Helix 18	AB9	B	650	654	Right-handed 310
Helix 19	AC1	C	57	63	Right-handed alpha
Helix 20	AC2	C	96	98	Right-handed 310
Helix 21	AC3	C	99	117	Right-handed alpha
Helix 22	AC4	C	122	127	Right-handed 310
Helix 23	AC5	C	335	349	Right-handed alpha
Helix 24	AC6	C	368	373	Right-handed alpha
Helix 25	AC7	C	398	407	Right-handed 310
Helix 26	AC8	C	425	429	Right-handed 310
Helix 27	AC9	C	476	481	Right-handed alpha
Helix 28	AD1	D	531	535	Right-handed 310
Helix 29	AD2	D	537	542	Right-handed alpha
Helix 30	AD3	D	547	552	Right-handed alpha
Helix 31	AD4	D	569	596	Right-handed alpha
Helix 32	AD5	D	618	623	Right-handed alpha
Helix 33	AD6	D	630	635	Right-handed 310
Helix 34	AD7	D	638	653	Right-handed alpha
Helix 35	AD8	E	57	63	Right-handed alpha
Helix 36	AD9	E	99	117	Right-handed alpha
Helix 37	AE1	E	123	127	Right-handed 310
Helix 38	AE2	E	334	349	Right-handed alpha
Helix 39	AE3	E	368	373	Right-handed alpha
Helix 40	AE4	E	404	409	Right-handed alpha
Helix 41	AE5	E	425	429	Right-handed 310
Helix 42	AE6	E	476	484	Right-handed alpha
Helix 43	AE7	F	531	535	Right-handed 310
Helix 44	AE8	F	537	542	Right-handed alpha
Helix 45	AE9	F	543	545	Right-handed 310
Helix 46	AF1	F	546	552	Right-handed alpha
Helix 47	AF2	F	553	555	Right-handed 310
Helix 48	AF3	F	569	596	Right-handed alpha
Helix 49	AF4	F	620	625	Right-handed alpha
Helix 50	AF5	F	628	635	Right-handed alpha
Helix 51	AF6	F	638	653	Right-handed alpha
Helix 52	AF7	H	28	32	Right-handed 310
Helix 53	AF8	H	83	87	Right-handed 310
Helix 54	AF9	H	187	189	Right-handed 310
Helix 55	AG1	L	121	126	Right-handed alpha
Helix 56	AG2	L	181	188	Right-handed alpha

There are 38 sheets in PDB entry 6ULC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	495	499	first strand
Strand 2	A	35	39	anti-parallel
Strand 3	B	604	609	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	487	490	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	83	86	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	236	239	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	132	first strand
Strand 2	A	155	162	anti-parallel
Strand 3	A	168	176	anti-parallel
Strand 4	H	100	100	parallel
Strand 5	H	100	100	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	191	193	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	273	first strand
Strand 2	A	283	287	anti-parallel
Strand 3	A	451	456	anti-parallel
Strand 4	A	467	470	anti-parallel
Strand 5	A	360	361	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	416	first strand
Strand 2	A	330	333	anti-parallel
Strand 3	A	294	297	anti-parallel
Strand 4	A	446	447	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	305	308	first strand
Strand 2	A	316	318	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	378	first strand
Strand 2	A	381	385	anti-parallel
Strand 3	A	418	421	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	495	499	first strand
Strand 2	C	35	39	anti-parallel
Strand 3	D	605	609	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	488	490	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	84	86	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	216	218	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	236	239	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	154	162	anti-parallel
Strand 3	C	169	177	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	273	first strand
Strand 2	C	283	287	anti-parallel
Strand 3	C	451	456	anti-parallel
Strand 4	C	467	469	anti-parallel
Strand 5	C	360	361	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	378	first strand
Strand 2	C	381	385	anti-parallel
Strand 3	C	413	421	anti-parallel
Strand 4	C	330	334	anti-parallel
Strand 5	C	294	297	anti-parallel
Strand 6	C	446	447	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	305	308	first strand
Strand 2	C	316	318	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	424	first strand
Strand 2	C	434	435	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	40	first strand
Strand 2	E	494	499	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	86	first strand
Strand 2	E	242	245	anti-parallel
Strand 3	E	223	228	anti-parallel
Strand 4	E	486	490	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	93	first strand
Strand 2	E	237	239	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	132	first strand
Strand 2	E	155	162	anti-parallel
Strand 3	E	169	176	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	183	first strand
Strand 2	E	191	193	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	200	203	first strand
Strand 2	E	432	435	parallel
Strand 3	E	423	424	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	259	261	first strand
Strand 2	E	443	456	anti-parallel
Strand 3	E	284	298	anti-parallel
Strand 4	E	330	333	anti-parallel
Strand 5	E	414	421	anti-parallel
Strand 6	E	381	385	anti-parallel
Strand 7	E	374	378	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	271	274	first strand
Strand 2	E	284	298	anti-parallel
Strand 3	E	443	456	anti-parallel
Strand 4	E	468	470	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	305	308	first strand
Strand 2	E	316	318	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	19	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	93	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	130	first strand
Strand 2	H	135	145	anti-parallel
Strand 3	H	176	185	anti-parallel
Strand 4	H	164	165	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	130	first strand
Strand 2	H	135	145	anti-parallel
Strand 3	H	176	185	anti-parallel
Strand 4	H	169	170	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	150	154	first strand
Strand 2	H	196	200	anti-parallel
Strand 3	H	205	209	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	13	first strand
Strand 2	L	103	106	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	23	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	63	67	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	48	first strand
Strand 2	L	34	38	anti-parallel
Strand 3	L	85	91	anti-parallel
Strand 4	L	96	97	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	118	first strand
Strand 2	L	130	139	anti-parallel
Strand 3	L	172	180	anti-parallel
Strand 4	L	159	160	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	118	first strand
Strand 2	L	130	139	anti-parallel
Strand 3	L	172	180	anti-parallel
Strand 4	L	165	166	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	145	150	first strand
Strand 2	L	191	196	anti-parallel
Strand 3	L	201	206	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ULC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULC