Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ULO entry

There are 2 chains in PDB entry 6ULO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 28THR 344
B
 GLY 40VAL 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6ULO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
36 48Right-handed alpha
Helix 3
AA3
A
61 66Right-handed 310
Helix 4
AA4
A
71 74Right-handed 310
Helix 5
AA5
A
75 80Right-handed alpha
Helix 6
AA6
A
92 102Right-handed alpha
Helix 7
AA7
A
112 129Right-handed alpha
Helix 8
AA8
A
131 140Right-handed alpha
Helix 9
AA9
A
143 155Right-handed alpha
Helix 10
AB1
A
157 186Right-handed alpha
Helix 11
AB2
A
194 207Right-handed alpha
Helix 12
AB3
A
221 234Right-handed alpha
Helix 13
AB4
A
244 249Right-handed 310
Helix 14
AB5
A
252 261Right-handed alpha
Helix 15
AB6
A
286 290Right-handed 310
Helix 16
AB7
A
302 311Right-handed alpha
Helix 17
AB8
A
317 325Right-handed alpha
Helix 18
AB9
B
41 48Right-handed alpha
Helix 19
AC1
B
61 66Right-handed 310
Helix 20
AC2
B
71 74Right-handed 310
Helix 21
AC3
B
75 80Right-handed alpha
Helix 22
AC4
B
92 102Right-handed alpha
Helix 23
AC5
B
112 129Right-handed alpha
Helix 24
AC6
B
131 140Right-handed alpha
Helix 25
AC7
B
143 155Right-handed alpha
Helix 26
AC8
B
157 186Right-handed alpha
Helix 27
AC9
B
194 207Right-handed alpha
Helix 28
AD1
B
221 234Right-handed alpha
Helix 29
AD2
B
244 249Right-handed 310
Helix 30
AD3
B
252 261Right-handed alpha
Helix 31
AD4
B
286 290Right-handed 310
Helix 32
AD5
B
302 310Right-handed alpha
Helix 33
AD6
B
317 325Right-handed alpha
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There are 2 sheets in PDB entry 6ULO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 214first strand
Strand 2
A
105 110parallel
Strand 3
A
85 88parallel
Strand 4
A
237 241parallel
Strand 5
A
264 274parallel
Strand 6
A
296 301anti-parallel
Strand 7
A
334 337parallel
Strand 8
A
326 329anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 214first strand
Strand 2
B
105 110parallel
Strand 3
B
85 88parallel
Strand 4
B
237 241parallel
Strand 5
B
264 274parallel
Strand 6
B
296 301anti-parallel
Strand 7
B
334 337parallel
Strand 8
B
326 329anti-parallel
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