Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ULP entry

There are 5 chains in PDB entry 6ULP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 307PRO 416
B
 LEU 308PRO 416
C
 TRP 1TRP 1
C
 GLN 3LYS 5
C
 TYR 7CYS 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6ULP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
309 323Right-handed alpha
Helix 2
AA2
A
324 326Right-handed 310
Helix 3
AA3
A
327 332Right-handed alpha
Helix 4
AA4
A
333 335Right-handed 310
Helix 5
AA5
A
347 352Right-handed alpha
Helix 6
AA6
A
357 367Right-handed alpha
Helix 7
AA7
A
372 391Right-handed alpha
Helix 8
AA8
A
395 414Right-handed alpha
Helix 9
AA9
B
309 323Right-handed alpha
Helix 10
AB1
B
327 332Right-handed alpha
Helix 11
AB2
B
333 335Right-handed 310
Helix 12
AB3
B
347 352Right-handed alpha
Helix 13
AB4
B
357 367Right-handed alpha
Helix 14
AB5
B
372 391Right-handed alpha
Helix 15
AB6
B
395 413Right-handed alpha
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There are no sheets in PDB entry 6ULP
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