Analysis of interatomic Contacts of Structural Units in PDB entry:
6ULX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ULX entry

There is 1 chain in PDB entry 6ULX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 83GLU 653
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6ULX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 109Right-handed alpha
Helix 2
AA2
A
128 145Right-handed alpha
Helix 3
AA3
A
159 174Right-handed alpha
Helix 4
AA4
A
190 203Right-handed alpha
Helix 5
AA5
A
211 219Right-handed alpha
Helix 6
AA6
A
220 225Right-handed alpha
Helix 7
AA7
A
236 241Right-handed 310
Helix 8
AA8
A
275 290Right-handed alpha
Helix 9
AA9
A
305 310Right-handed alpha
Helix 10
AB1
A
312 320Right-handed alpha
Helix 11
AB2
A
327 334Right-handed alpha
Helix 12
AB3
A
336 346Right-handed alpha
Helix 13
AB4
A
353 362Right-handed alpha
Helix 14
AB5
A
363 368Right-handed alpha
Helix 15
AB6
A
388 400Right-handed alpha
Helix 16
AB7
A
401 403Right-handed 310
Helix 17
AB8
A
416 419Right-handed 310
Helix 18
AB9
A
443 445Right-handed 310
Helix 19
AC1
A
506 514Right-handed alpha
Helix 20
AC2
A
515 519Right-handed 310
Helix 21
AC3
A
540 542Right-handed 310
Helix 22
AC4
A
551 562Right-handed alpha
Helix 23
AC5
A
595 614Right-handed alpha
Helix 24
AC6
A
617 621Right-handed 310
Helix 25
AC7
A
641 653Right-handed alpha
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There are 6 sheets in PDB entry 6ULX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
473 477anti-parallel
Strand 3
A
490 495anti-parallel
Strand 4
A
520 529anti-parallel
Strand 5
A
532 538anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
113 119anti-parallel
Strand 3
A
322 325parallel
Strand 4
A
296 299parallel
Strand 5
A
349 352parallel
Strand 6
A
379 382parallel
Strand 7
A
409 415parallel
Strand 8
A
420 424anti-parallel
Strand 9
A
467 468anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 234first strand
Strand 2
A
207 210parallel
Strand 3
A
152 156parallel
Strand 4
A
176 179parallel
Strand 5
A
255 260parallel
Strand 6
A
270 274anti-parallel
Strand 7
A
502 503anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 441first strand
Strand 2
A
459 463anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 545first strand
Strand 2
A
548 550anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 571first strand
Strand 2
A
586 591anti-parallel
Strand 3
A
622 624parallel
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