Analysis of interatomic Contacts of Structural Units in PDB entry:
6UNC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UNC entry

There are 4 chains in PDB entry 6UNC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 15	TYR 292
B	VAL 14	GLY 295
C	VAL 14	PRO 294
D	GLY 15	GLN 291

There are 45 helices in PDB entry 6UNC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	33	39	Right-handed alpha
Helix 2	AA2	A	58	71	Right-handed alpha
Helix 3	AA3	A	96	112	Right-handed alpha
Helix 4	AA4	A	150	161	Right-handed alpha
Helix 5	AA5	A	166	171	Right-handed alpha
Helix 6	AA6	A	178	196	Right-handed alpha
Helix 7	AA7	A	213	219	Right-handed 310
Helix 8	AA8	A	221	228	Right-handed 310
Helix 9	AA9	A	230	234	Right-handed 310
Helix 10	AB1	A	235	240	Right-handed alpha
Helix 11	AB2	A	270	275	Right-handed alpha
Helix 12	AB3	B	33	39	Right-handed alpha
Helix 13	AB4	B	58	71	Right-handed alpha
Helix 14	AB5	B	96	112	Right-handed alpha
Helix 15	AB6	B	150	161	Right-handed alpha
Helix 16	AB7	B	166	171	Right-handed alpha
Helix 17	AB8	B	178	196	Right-handed alpha
Helix 18	AB9	B	213	219	Right-handed 310
Helix 19	AC1	B	221	228	Right-handed 310
Helix 20	AC2	B	230	234	Right-handed 310
Helix 21	AC3	B	235	240	Right-handed alpha
Helix 22	AC4	B	270	275	Right-handed alpha
Helix 23	AC5	C	33	39	Right-handed alpha
Helix 24	AC6	C	58	71	Right-handed alpha
Helix 25	AC7	C	96	110	Right-handed alpha
Helix 26	AC8	C	150	161	Right-handed alpha
Helix 27	AC9	C	166	171	Right-handed alpha
Helix 28	AD1	C	178	196	Right-handed alpha
Helix 29	AD2	C	213	219	Right-handed 310
Helix 30	AD3	C	221	228	Right-handed 310
Helix 31	AD4	C	230	234	Right-handed 310
Helix 32	AD5	C	235	240	Right-handed alpha
Helix 33	AD6	C	270	275	Right-handed alpha
Helix 34	AD7	D	30	32	Right-handed 310
Helix 35	AD8	D	33	39	Right-handed alpha
Helix 36	AD9	D	58	71	Right-handed alpha
Helix 37	AE1	D	96	110	Right-handed alpha
Helix 38	AE2	D	150	161	Right-handed alpha
Helix 39	AE3	D	166	171	Right-handed alpha
Helix 40	AE4	D	178	196	Right-handed alpha
Helix 41	AE5	D	213	219	Right-handed 310
Helix 42	AE6	D	221	228	Right-handed 310
Helix 43	AE7	D	230	234	Right-handed 310
Helix 44	AE8	D	235	240	Right-handed alpha
Helix 45	AE9	D	270	275	Right-handed alpha

There are 8 sheets in PDB entry 6UNC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	79	first strand
Strand 2	A	48	52	parallel
Strand 3	A	20	23	parallel
Strand 4	A	284	287	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	130	134	anti-parallel
Strand 3	A	203	206	parallel
Strand 4	A	242	247	parallel
Strand 5	A	261	265	parallel
Strand 6	A	254	258	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	79	first strand
Strand 2	B	48	52	parallel
Strand 3	B	20	23	parallel
Strand 4	B	284	287	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	123	first strand
Strand 2	B	130	134	anti-parallel
Strand 3	B	203	206	parallel
Strand 4	B	242	247	parallel
Strand 5	B	261	265	parallel
Strand 6	B	254	258	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	79	first strand
Strand 2	C	48	52	parallel
Strand 3	C	20	23	parallel
Strand 4	C	284	287	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	122	123	first strand
Strand 2	C	130	134	anti-parallel
Strand 3	C	203	206	parallel
Strand 4	C	242	247	parallel
Strand 5	C	261	265	parallel
Strand 6	C	254	258	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	79	first strand
Strand 2	D	48	52	parallel
Strand 3	D	20	23	parallel
Strand 4	D	284	287	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	122	123	first strand
Strand 2	D	130	134	anti-parallel
Strand 3	D	203	206	parallel
Strand 4	D	242	247	parallel
Strand 5	D	261	265	parallel
Strand 6	D	254	258	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UNC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UNC