Analysis of interatomic Contacts of Structural Units in PDB entry:
6UNP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UNP entry

There are 8 chains in PDB entry 6UNP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 199LEU 287
A
 LYS 289ASP 396
A
 GLU 398GLN 495
A
 ALA 497GLU 509
B
 SER 197LEU 287
B
 LYS 289ASP 396
B
 GLU 398GLN 495
B
 ALA 497GLU 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6UNP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
199 201Right-handed 310
Helix 2
AA2
A
236 248Right-handed alpha
Helix 3
AA3
A
286 294Right-handed alpha
Helix 4
AA4
A
297 316Right-handed alpha
Helix 5
AA5
A
321 325Right-handed 310
Helix 6
AA6
A
379 383Right-handed 310
Helix 7
AA7
A
384 389Right-handed alpha
Helix 8
AA8
A
393 395Right-handed 310
Helix 9
AA9
A
396 418Right-handed alpha
Helix 10
AB1
A
419 424Right-handed 310
Helix 11
AB2
A
436 441Right-handed alpha
Helix 12
AB3
A
445 454Right-handed alpha
Helix 13
AB4
A
470 482Right-handed alpha
Helix 14
AB5
A
487 491Right-handed 310
Helix 15
AB6
A
493 507Right-handed alpha
Helix 16
AB7
B
199 203Right-handed 310
Helix 17
AB8
B
233 235Right-handed 310
Helix 18
AB9
B
236 248Right-handed alpha
Helix 19
AC1
B
286 294Right-handed alpha
Helix 20
AC2
B
297 317Right-handed alpha
Helix 21
AC3
B
379 383Right-handed 310
Helix 22
AC4
B
384 389Right-handed alpha
Helix 23
AC5
B
396 418Right-handed alpha
Helix 24
AC6
B
419 424Right-handed 310
Helix 25
AC7
B
436 441Right-handed alpha
Helix 26
AC8
B
445 454Right-handed alpha
Helix 27
AC9
B
470 484Right-handed alpha
Helix 28
AD1
B
487 491Right-handed 310
Helix 29
AD2
B
493 507Right-handed alpha
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There are 7 sheets in PDB entry 6UNP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 211first strand
Strand 2
A
216 222anti-parallel
Strand 3
A
225 233anti-parallel
Strand 4
A
273 279anti-parallel
Strand 5
A
260 267anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
356 357anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 341first strand
Strand 2
A
347 349anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 211first strand
Strand 2
B
216 222anti-parallel
Strand 3
B
225 232anti-parallel
Strand 4
B
273 279anti-parallel
Strand 5
B
260 267anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 321first strand
Strand 2
B
324 326anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 330first strand
Strand 2
B
356 357anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 341first strand
Strand 2
B
347 349anti-parallel
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