Analysis of interatomic Contacts of Structural Units in PDB entry:
6UOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UOA entry

There are 2 chains in PDB entry 6UOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 167THR 862
B
 SER 53THR 749
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6UOA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
184 200Right-handed alpha
Helix 2
AA2
A
221 234Right-handed alpha
Helix 3
AA3
A
246 257Right-handed alpha
Helix 4
AA4
A
258 261Right-handed 310
Helix 5
AA5
A
271 276Right-handed 310
Helix 6
AA6
A
289 292Right-handed 310
Helix 7
AA7
A
293 305Right-handed alpha
Helix 8
AA8
A
316 331Right-handed alpha
Helix 9
AA9
A
332 334Right-handed 310
Helix 10
AB1
A
347 358Right-handed alpha
Helix 11
AB2
A
367 381Right-handed alpha
Helix 12
AB3
A
411 419Right-handed alpha
Helix 13
AB4
A
442 454Right-handed alpha
Helix 14
AB5
A
466 485Right-handed alpha
Helix 15
AB6
A
503 515Right-handed alpha
Helix 16
AB7
A
589 615Right-handed alpha
Helix 17
AB8
A
628 644Right-handed alpha
Helix 18
AB9
A
658 693Right-handed alpha
Helix 19
AC1
A
708 732Right-handed alpha
Helix 20
AC2
A
766 791Right-handed alpha
Helix 21
AC3
A
802 825Right-handed alpha
Helix 22
AC4
A
832 853Right-handed alpha
Helix 23
AC5
A
853 861Right-handed alpha
Helix 24
AC6
B
69 92Right-handed alpha
Helix 25
AC7
B
109 124Right-handed alpha
Helix 26
AC8
B
135 146Right-handed alpha
Helix 27
AC9
B
147 149Right-handed 310
Helix 28
AD1
B
160 165Right-handed 310
Helix 29
AD2
B
178 181Right-handed 310
Helix 30
AD3
B
182 194Right-handed alpha
Helix 31
AD4
B
205 219Right-handed alpha
Helix 32
AD5
B
235 246Right-handed alpha
Helix 33
AD6
B
257 269Right-handed alpha
Helix 34
AD7
B
288 292Right-handed 310
Helix 35
AD8
B
304 309Right-handed alpha
Helix 36
AD9
B
334 346Right-handed alpha
Helix 37
AE1
B
354 374Right-handed alpha
Helix 38
AE2
B
377 387Right-handed alpha
Helix 39
AE3
B
393 405Right-handed alpha
Helix 40
AE4
B
478 507Right-handed alpha
Helix 41
AE5
B
518 534Right-handed alpha
Helix 42
AE6
B
546 550Right-handed 310
Helix 43
AE7
B
551 582Right-handed alpha
Helix 44
AE8
B
591 619Right-handed alpha
Helix 45
AE9
B
653 678Right-handed alpha
Helix 46
AF1
B
691 712Right-handed alpha
Helix 47
AF2
B
718 741Right-handed alpha
Helix 48
AF3
B
742 748Right-handed alpha
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There are 9 sheets in PDB entry 6UOA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 175first strand
Strand 2
A
210 216parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
263 266parallel
Strand 3
A
283 285parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 343first strand
Strand 2
A
309 314parallel
Strand 3
A
361 365parallel
Strand 4
A
389 393parallel
Strand 5
A
423 427parallel
Strand 6
A
536 542anti-parallel
Strand 7
A
547 554anti-parallel
Strand 8
A
559 561anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 520first strand
Strand 2
A
523 526anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 583first strand
Strand 2
A
752 757parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 105first strand
Strand 2
B
55 62parallel
Strand 3
B
129 132parallel
Strand 4
B
153 155parallel
Strand 5
B
172 174parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 230first strand
Strand 2
B
197 202parallel
Strand 3
B
250 254parallel
Strand 4
B
278 281parallel
Strand 5
B
314 319parallel
Strand 6
B
425 432anti-parallel
Strand 7
B
435 443anti-parallel
Strand 8
B
448 451anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
408 410first strand
Strand 2
B
413 415anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
470 474first strand
Strand 2
B
640 647parallel
Strand 3
B
624 627anti-parallel
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