Analysis of interatomic Contacts of Structural Units in PDB entry:
6UOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UOX entry

There is 1 chain in PDB entry 6UOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 24VAL 1255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 6UOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 63Right-handed alpha
Helix 2
AA2
A
76 87Right-handed alpha
Helix 3
AA3
A
87 94Right-handed alpha
Helix 4
AA4
A
97 114Right-handed alpha
Helix 5
AA5
A
116 120Right-handed alpha
Helix 6
AA6
A
150 161Right-handed alpha
Helix 7
AA7
A
171 178Right-handed alpha
Helix 8
AA8
A
185 195Right-handed alpha
Helix 9
AA9
A
270 278Right-handed alpha
Helix 10
AB1
A
279 284Right-handed alpha
Helix 11
AB2
A
335 349Right-handed alpha
Helix 12
AB3
A
351 365Right-handed alpha
Helix 13
AB4
A
367 372Right-handed alpha
Helix 14
AB5
A
386 393Right-handed alpha
Helix 15
AB6
A
436 452Right-handed alpha
Helix 16
AB7
A
483 487Right-handed 310
Helix 17
AB8
A
508 516Right-handed alpha
Helix 18
AB9
A
577 593Right-handed alpha
Helix 19
AC1
A
607 617Right-handed alpha
Helix 20
AC2
A
618 620Right-handed 310
Helix 21
AC3
A
621 638Right-handed alpha
Helix 22
AC4
A
654 679Right-handed alpha
Helix 23
AC5
A
685 711Right-handed alpha
Helix 24
AC6
A
719 748Right-handed alpha
Helix 25
AC7
A
757 776Right-handed alpha
Helix 26
AC8
A
777 782Right-handed alpha
Helix 27
AC9
A
782 792Right-handed alpha
Helix 28
AD1
A
818 826Right-handed alpha
Helix 29
AD2
A
836 852Right-handed alpha
Helix 30
AD3
A
870 880Right-handed alpha
Helix 31
AD4
A
901 907Right-handed alpha
Helix 32
AD5
A
918 928Right-handed alpha
Helix 33
AD6
A
942 951Right-handed alpha
Helix 34
AD7
A
952 955Right-handed 310
Helix 35
AD8
A
993 1004Right-handed alpha
Helix 36
AD9
A
1047 1070Right-handed alpha
Helix 37
AE1
A
1089 1092Right-handed 310
Helix 38
AE2
A
1093 1118Right-handed alpha
Helix 39
AE3
A
1120 1146Right-handed alpha
Helix 40
AE4
A
1150 1164Right-handed alpha
Helix 41
AE5
A
1165 1177Right-handed alpha
Helix 42
AE6
A
1182 1194Right-handed alpha
Helix 43
AE7
A
1194 1201Right-handed alpha
Helix 44
AE8
A
1202 1215Right-handed alpha
Helix 45
AE9
A
1219 1224Right-handed alpha
Helix 46
AF1
A
1226 1242Right-handed alpha
Helix 47
AF2
A
1242 1249Right-handed alpha
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There are 12 sheets in PDB entry 6UOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
42 43anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
38 39anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
72 73anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 129first strand
Strand 2
A
138 149anti-parallel
Strand 3
A
206 210parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
560 563anti-parallel
Strand 3
A
406 411anti-parallel
Strand 4
A
600 605anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 420first strand
Strand 2
A
429 431anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 457first strand
Strand 2
A
460 462anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
505 507anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1036 1037first strand
Strand 2
A
888 893anti-parallel
Strand 3
A
1040 1041anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1036 1037first strand
Strand 2
A
888 893anti-parallel
Strand 3
A
1080 1081anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
966 967first strand
Strand 2
A
958 960anti-parallel
Strand 3
A
976 978anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1025 1027first strand
Strand 2
A
1031 1033anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il