Analysis of interatomic Contacts of Structural Units in PDB entry:
6URI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6URI entry

There are 4 chains in PDB entry 6URI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9LYS 619
S
 MET 1GLU 142
N
 SER 34PHE 203
B
 GLY 13ASN 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 6URI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 22Right-handed alpha
Helix 2
AA2
A
25 47Right-handed alpha
Helix 3
AA3
A
52 69Right-handed alpha
Helix 4
AA4
A
75 84Right-handed alpha
Helix 5
AA5
A
87 101Right-handed alpha
Helix 6
AA6
A
106 121Right-handed alpha
Helix 7
AA7
A
124 139Right-handed alpha
Helix 8
AA8
A
140 148Right-handed alpha
Helix 9
AA9
A
149 156Right-handed alpha
Helix 10
AB1
A
161 179Right-handed alpha
Helix 11
AB2
A
180 183Right-handed 310
Helix 12
AB3
A
188 194Right-handed alpha
Helix 13
AB4
A
195 198Right-handed 310
Helix 14
AB5
A
200 218Right-handed alpha
Helix 15
AB6
A
219 223Right-handed 310
Helix 16
AB7
A
224 239Right-handed alpha
Helix 17
AB8
A
254 265Right-handed alpha
Helix 18
AB9
A
266 268Right-handed 310
Helix 19
AC1
A
273 291Right-handed alpha
Helix 20
AC2
A
299 321Right-handed alpha
Helix 21
AC3
A
323 338Right-handed alpha
Helix 22
AC4
A
342 357Right-handed alpha
Helix 23
AC5
A
362 368Right-handed alpha
Helix 24
AC6
A
369 380Right-handed alpha
Helix 25
AC7
A
382 396Right-handed alpha
Helix 26
AC8
A
401 414Right-handed alpha
Helix 27
AC9
A
415 416Right-handed 310
Helix 28
AD1
A
417 419Right-handed 310
Helix 29
AD2
A
420 435Right-handed alpha
Helix 30
AD3
A
438 453Right-handed alpha
Helix 31
AD4
A
458 472Right-handed alpha
Helix 32
AD5
A
475 488Right-handed alpha
Helix 33
AD6
A
493 508Right-handed alpha
Helix 34
AD7
A
508 513Right-handed alpha
Helix 35
AD8
A
518 528Right-handed alpha
Helix 36
AD9
A
534 552Right-handed alpha
Helix 37
AE1
A
555 564Right-handed alpha
Helix 38
AE2
A
565 570Right-handed alpha
Helix 39
AE3
A
573 589Right-handed alpha
Helix 40
AE4
A
591 599Right-handed alpha
Helix 41
AE5
A
610 618Right-handed alpha
Helix 42
AE6
S
24 40Right-handed alpha
Helix 43
AE7
S
76 96Right-handed alpha
Helix 44
AE8
S
101 106Right-handed alpha
Helix 45
AE9
S
106 117Right-handed alpha
Helix 46
AF1
S
127 141Right-handed alpha
Helix 47
AF2
N
52 59Right-handed alpha
Helix 48
AF3
N
62 67Right-handed alpha
Helix 49
AF4
N
80 94Right-handed alpha
Helix 50
AF5
N
103 119Right-handed alpha
Helix 51
AF6
N
149 157Right-handed alpha
Helix 52
AF7
N
166 170Right-handed 310
Helix 53
AF8
N
187 192Right-handed alpha
Helix 54
AF9
N
193 199Right-handed alpha
Helix 55
AG1
N
200 203Right-handed 310
Helix 56
AG2
B
14 23Right-handed alpha
Helix 57
AG3
B
91 95Right-handed 310
Helix 58
AG4
B
99 113Right-handed alpha
Helix 59
AG5
B
125 132Right-handed alpha
Helix 60
AG6
B
134 152Right-handed alpha
Helix 61
AG7
B
167 171Right-handed 310
Helix 62
AG8
B
173 188Right-handed alpha
Helix 63
AG9
B
206 214Right-handed alpha
Helix 64
AH1
B
215 228Right-handed alpha
Helix 65
AH2
B
233 243Right-handed alpha
Helix 66
AH3
B
244 248Right-handed 310
Helix 67
AH4
B
252 267Right-handed alpha
Helix 68
AH5
B
275 284Right-handed alpha
Helix 69
AH6
B
284 291Right-handed alpha
Helix 70
AH7
B
292 294Right-handed 310
Helix 71
AH8
B
295 313Right-handed alpha
Helix 72
AH9
B
331 346Right-handed alpha
Helix 73
AI1
B
350 362Right-handed alpha
Helix 74
AI2
B
366 380Right-handed alpha
Helix 75
AI3
B
381 383Right-handed 310
Helix 76
AI4
B
387 402Right-handed alpha
Helix 77
AI5
B
403 421Right-handed alpha
Helix 78
AI6
B
428 434Right-handed alpha
Helix 79
AI7
B
441 455Right-handed alpha
Helix 80
AI8
B
461 471Right-handed alpha
Helix 81
AI9
B
477 495Right-handed alpha
Helix 82
AJ1
B
499 513Right-handed alpha
Helix 83
AJ2
B
516 533Right-handed alpha
Helix 84
AJ3
B
533 542Right-handed alpha
Helix 85
AJ4
B
556 565Right-handed alpha
Helix 86
AJ5
B
569 575Right-handed alpha
Helix 87
AJ6
M
27 36Right-handed alpha
Helix 88
AJ7
M
74 94Right-handed alpha
Helix 89
AJ8
M
97 104Right-handed alpha
Helix 90
AJ9
M
105 115Right-handed alpha
Helix 91
AK1
D
411 418Right-handed alpha
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There are 5 sheets in PDB entry 6URI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
14 19first strand
Strand 2
S
2 9anti-parallel
Strand 3
S
65 71anti-parallel
Strand 4
S
55 62anti-parallel
Strand 5
S
49 52anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
118 119first strand
Strand 2
S
122 123anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
143 147first strand
Strand 2
N
181 185anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
14 19first strand
Strand 2
M
4 8anti-parallel
Strand 3
M
63 69anti-parallel
Strand 4
M
53 60anti-parallel
Strand 5
M
48 50anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
116 117first strand
Strand 2
M
120 121anti-parallel
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