Analysis of interatomic Contacts of Structural Units in PDB entry:
6URO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6URO entry

There are 6 chains in PDB entry 6URO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PHE 1443
B	THR 42	LEU 419
C	MET 1	ASP 116
D	A 1	A 8
E	ALA 21	VAL 549
F	ALA 21	VAL 549

There are 80 helices in PDB entry 6URO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	125	129	Right-handed 310
Helix 2	AA2	A	487	491	Right-handed 310
Helix 3	AA3	A	506	509	Right-handed 310
Helix 4	AA4	A	1153	1156	Right-handed 310
Helix 5	AA5	A	1352	1369	Right-handed alpha
Helix 6	AA6	A	1372	1376	Right-handed 310
Helix 7	AA7	A	1377	1382	Right-handed alpha
Helix 8	AA8	A	1403	1407	Right-handed 310
Helix 9	AA9	A	1411	1421	Right-handed alpha
Helix 10	AB1	A	1425	1434	Right-handed alpha
Helix 11	AB2	A	1434	1439	Right-handed alpha
Helix 12	AB3	B	59	73	Right-handed alpha
Helix 13	AB4	B	85	89	Right-handed 310
Helix 14	AB5	B	101	106	Right-handed 310
Helix 15	AB6	C	13	21	Right-handed alpha
Helix 16	AB7	C	41	47	Right-handed alpha
Helix 17	AB8	C	78	82	Right-handed 310
Helix 18	AB9	C	96	101	Right-handed alpha
Helix 19	AC1	E	22	28	Right-handed alpha
Helix 20	AC2	E	31	41	Right-handed alpha
Helix 21	AC3	E	46	59	Right-handed alpha
Helix 22	AC4	E	64	78	Right-handed alpha
Helix 23	AC5	E	80	92	Right-handed alpha
Helix 24	AC6	E	97	112	Right-handed alpha
Helix 25	AC7	E	113	115	Right-handed 310
Helix 26	AC8	E	117	133	Right-handed alpha
Helix 27	AC9	E	139	153	Right-handed alpha
Helix 28	AD1	E	158	176	Right-handed alpha
Helix 29	AD2	E	182	198	Right-handed alpha
Helix 30	AD3	E	198	209	Right-handed alpha
Helix 31	AD4	E	209	223	Right-handed alpha
Helix 32	AD5	E	223	228	Right-handed alpha
Helix 33	AD6	E	244	261	Right-handed alpha
Helix 34	AD7	E	268	287	Right-handed alpha
Helix 35	AD8	E	290	311	Right-handed alpha
Helix 36	AD9	E	316	334	Right-handed alpha
Helix 37	AE1	E	340	353	Right-handed alpha
Helix 38	AE2	E	355	368	Right-handed alpha
Helix 39	AE3	E	373	390	Right-handed alpha
Helix 40	AE4	E	390	403	Right-handed alpha
Helix 41	AE5	E	409	424	Right-handed alpha
Helix 42	AE6	E	426	440	Right-handed alpha
Helix 43	AE7	E	443	455	Right-handed alpha
Helix 44	AE8	E	459	471	Right-handed alpha
Helix 45	AE9	E	481	495	Right-handed alpha
Helix 46	AF1	E	497	512	Right-handed alpha
Helix 47	AF2	E	512	517	Right-handed alpha
Helix 48	AF3	E	519	529	Right-handed alpha
Helix 49	AF4	E	537	545	Right-handed alpha
Helix 50	AF5	F	22	28	Right-handed alpha
Helix 51	AF6	F	31	41	Right-handed alpha
Helix 52	AF7	F	46	59	Right-handed alpha
Helix 53	AF8	F	64	78	Right-handed alpha
Helix 54	AF9	F	80	92	Right-handed alpha
Helix 55	AG1	F	97	112	Right-handed alpha
Helix 56	AG2	F	113	115	Right-handed 310
Helix 57	AG3	F	117	133	Right-handed alpha
Helix 58	AG4	F	139	153	Right-handed alpha
Helix 59	AG5	F	158	176	Right-handed alpha
Helix 60	AG6	F	182	198	Right-handed alpha
Helix 61	AG7	F	198	209	Right-handed alpha
Helix 62	AG8	F	209	223	Right-handed alpha
Helix 63	AG9	F	223	228	Right-handed alpha
Helix 64	AH1	F	244	261	Right-handed alpha
Helix 65	AH2	F	268	287	Right-handed alpha
Helix 66	AH3	F	290	311	Right-handed alpha
Helix 67	AH4	F	316	334	Right-handed alpha
Helix 68	AH5	F	340	353	Right-handed alpha
Helix 69	AH6	F	355	368	Right-handed alpha
Helix 70	AH7	F	373	390	Right-handed alpha
Helix 71	AH8	F	390	403	Right-handed alpha
Helix 72	AH9	F	409	424	Right-handed alpha
Helix 73	AI1	F	426	440	Right-handed alpha
Helix 74	AI2	F	443	455	Right-handed alpha
Helix 75	AI3	F	459	471	Right-handed alpha
Helix 76	AI4	F	481	495	Right-handed alpha
Helix 77	AI5	F	497	512	Right-handed alpha
Helix 78	AI6	F	512	517	Right-handed alpha
Helix 79	AI7	F	519	529	Right-handed alpha
Helix 80	AI8	F	537	545	Right-handed alpha

There are 37 sheets in PDB entry 6URO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1348	1350	first strand
Strand 2	A	3	5	anti-parallel
Strand 3	A	1398	1400	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	20	first strand
Strand 2	A	29	34	anti-parallel
Strand 3	A	37	41	anti-parallel
Strand 4	A	68	73	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	84	first strand
Strand 2	A	93	98	anti-parallel
Strand 3	A	102	106	anti-parallel
Strand 4	A	117	122	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	143	first strand
Strand 2	A	149	154	anti-parallel
Strand 3	A	158	163	anti-parallel
Strand 4	A	189	192	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	208	first strand
Strand 2	A	216	221	anti-parallel
Strand 3	A	238	244	anti-parallel
Strand 4	A	257	261	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	270	first strand
Strand 2	A	278	282	anti-parallel
Strand 3	A	285	289	anti-parallel
Strand 4	A	296	299	anti-parallel
Strand 5	A	312	314	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	A	335	338	anti-parallel
Strand 3	A	343	351	anti-parallel
Strand 4	A	357	361	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	A	335	338	anti-parallel
Strand 3	A	343	351	anti-parallel
Strand 4	A	364	367	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	376	first strand
Strand 2	A	382	383	anti-parallel
Strand 3	A	392	398	anti-parallel
Strand 4	A	461	468	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	481	first strand
Strand 2	A	499	502	anti-parallel
Strand 3	A	511	515	anti-parallel
Strand 4	A	1015	1017	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	522	528	first strand
Strand 2	A	995	1000	anti-parallel
Strand 3	A	986	991	anti-parallel
Strand 4	A	972	978	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	539	first strand
Strand 2	A	572	578	anti-parallel
Strand 3	A	583	587	anti-parallel
Strand 4	A	593	594	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	608	612	first strand
Strand 2	A	617	621	anti-parallel
Strand 3	A	625	629	anti-parallel
Strand 4	A	634	639	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	651	first strand
Strand 2	A	655	660	anti-parallel
Strand 3	A	665	671	anti-parallel
Strand 4	A	681	685	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	695	701	first strand
Strand 2	A	784	789	anti-parallel
Strand 3	A	794	798	anti-parallel
Strand 4	A	804	808	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	846	854	first strand
Strand 2	A	860	867	anti-parallel
Strand 3	A	871	874	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	877	878	first strand
Strand 2	A	890	891	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	931	937	first strand
Strand 2	A	940	945	anti-parallel
Strand 3	A	951	954	anti-parallel
Strand 4	A	962	965	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1027	1028	first strand
Strand 2	A	1033	1034	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1037	1043	first strand
Strand 2	A	1070	1076	anti-parallel
Strand 3	A	1092	1093	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1046	1050	first strand
Strand 2	A	1055	1059	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1098	1106	first strand
Strand 2	A	1120	1127	anti-parallel
Strand 3	A	1137	1142	anti-parallel
Strand 4	A	1164	1167	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1144	1146	first strand
Strand 2	A	1158	1160	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1172	1178	first strand
Strand 2	A	1181	1186	anti-parallel
Strand 3	A	1189	1195	anti-parallel
Strand 4	A	1200	1207	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1212	1217	first strand
Strand 2	A	1221	1226	anti-parallel
Strand 3	A	1231	1237	anti-parallel
Strand 4	A	1242	1248	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1255	1258	first strand
Strand 2	A	1267	1273	anti-parallel
Strand 3	A	1261	1262	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1255	1258	first strand
Strand 2	A	1267	1273	anti-parallel
Strand 3	A	1278	1282	anti-parallel
Strand 4	A	1297	1302	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1312	1315	first strand
Strand 2	A	1334	1339	anti-parallel
Strand 3	A	1345	1346	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	112	first strand
Strand 2	B	401	403	anti-parallel
Strand 3	B	389	391	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	125	first strand
Strand 2	B	136	138	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	134	first strand
Strand 2	B	146	147	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	168	first strand
Strand 2	B	176	180	anti-parallel
Strand 3	B	184	188	anti-parallel
Strand 4	B	198	199	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	210	first strand
Strand 2	B	216	220	anti-parallel
Strand 3	B	226	230	anti-parallel
Strand 4	B	236	240	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	252	first strand
Strand 2	B	259	263	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	273	first strand
Strand 2	B	280	284	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	296	first strand
Strand 2	B	302	307	anti-parallel
Strand 3	B	311	316	anti-parallel
Strand 4	B	326	327	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	339	first strand
Strand 2	B	346	349	anti-parallel
Strand 3	B	356	360	anti-parallel
Strand 4	B	369	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6URO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6URO