Analysis of interatomic Contacts of Structural Units in PDB entry:
6URV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6URV entry

There are 8 chains in PDB entry 6URV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 48LEU 86
H
 GLU 18THR 171
G
 ASP 49LEU 86
E
 ASP 49LEU 86
F
 CYS 17THR 171
C
 MET 48LEU 86
D
 TYR 19THR 171
B
 GLU 18THR 171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6URV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
52 56Right-handed alpha
Helix 2
AA2
F
52 56Right-handed alpha
Helix 3
AA3
F
134 138Right-handed 310
Helix 4
AA4
D
52 56Right-handed alpha
Helix 5
AA5
B
52 56Right-handed alpha
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There are 10 sheets in PDB entry 6URV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
60 62anti-parallel
Strand 3
A
51 57parallel
Strand 4
B
23 31anti-parallel
Strand 5
B
34 44anti-parallel
Strand 6
B
47 51anti-parallel
Strand 7
B
78 81anti-parallel
Strand 8
B
69 73anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
B
109 113parallel
Strand 3
B
97 101anti-parallel
Strand 4
B
140 143anti-parallel
Strand 5
B
149 158anti-parallel
Strand 6
B
164 169anti-parallel
Strand 7
B
125 129anti-parallel
Strand 8
B
116 120anti-parallel
Strand 9
A
73 78parallel
Strand 10
A
84 85anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
65 67first strand
Strand 2
H
60 62anti-parallel
Strand 3
G
51 57parallel
Strand 4
H
23 31anti-parallel
Strand 5
H
34 44anti-parallel
Strand 6
H
47 51anti-parallel
Strand 7
H
78 81anti-parallel
Strand 8
H
69 73anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
149 152first strand
Strand 2
H
141 143anti-parallel
Strand 3
H
97 101anti-parallel
Strand 4
H
109 113anti-parallel
Strand 5
G
66 67parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
156 158first strand
Strand 2
H
164 167anti-parallel
Strand 3
H
125 129anti-parallel
Strand 4
H
116 120anti-parallel
Strand 5
G
73 78parallel
Strand 6
G
84 85anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
65 67first strand
Strand 2
F
60 62anti-parallel
Strand 3
E
51 57parallel
Strand 4
F
23 31anti-parallel
Strand 5
F
34 44anti-parallel
Strand 6
F
47 51anti-parallel
Strand 7
F
78 81anti-parallel
Strand 8
F
69 73anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
84 85first strand
Strand 2
E
73 78anti-parallel
Strand 3
F
116 120parallel
Strand 4
F
125 129anti-parallel
Strand 5
F
164 167anti-parallel
Strand 6
F
156 158anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
109 113first strand
Strand 2
F
97 101anti-parallel
Strand 3
F
141 143anti-parallel
Strand 4
F
149 152anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 67first strand
Strand 2
D
60 62anti-parallel
Strand 3
C
51 57parallel
Strand 4
D
23 30anti-parallel
Strand 5
D
35 44anti-parallel
Strand 6
D
47 51anti-parallel
Strand 7
D
78 81anti-parallel
Strand 8
D
69 73anti-parallel
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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 67first strand
Strand 2
D
109 113parallel
Strand 3
D
97 101anti-parallel
Strand 4
D
141 143anti-parallel
Strand 5
D
149 158anti-parallel
Strand 6
D
164 169anti-parallel
Strand 7
D
125 129anti-parallel
Strand 8
D
116 120anti-parallel
Strand 9
C
73 78parallel
Strand 10
C
84 85anti-parallel
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