Analysis of interatomic Contacts of Structural Units in PDB entry:
6USS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6USS entry

There are 2 chains in PDB entry 6USS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 33ILE 517
B
 ARG 33ILE 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6USS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 64Right-handed alpha
Helix 2
AA2
A
66 75Right-handed alpha
Helix 3
AA3
A
87 98Right-handed alpha
Helix 4
AA4
A
100 105Right-handed alpha
Helix 5
AA5
A
148 156Right-handed alpha
Helix 6
AA6
A
173 177Right-handed 310
Helix 7
AA7
A
199 206Right-handed 310
Helix 8
AA8
A
221 225Right-handed 310
Helix 9
AA9
A
230 248Right-handed alpha
Helix 10
AB1
A
272 280Right-handed alpha
Helix 11
AB2
A
282 309Right-handed alpha
Helix 12
AB3
A
311 313Right-handed 310
Helix 13
AB4
A
352 356Right-handed alpha
Helix 14
AB5
A
382 391Right-handed alpha
Helix 15
AB6
A
407 412Right-handed alpha
Helix 16
AB7
A
479 497Right-handed alpha
Helix 17
AB8
A
513 517Right-handed 310
Helix 18
AB9
B
58 64Right-handed alpha
Helix 19
AC1
B
66 75Right-handed alpha
Helix 20
AC2
B
87 98Right-handed alpha
Helix 21
AC3
B
100 105Right-handed alpha
Helix 22
AC4
B
148 156Right-handed alpha
Helix 23
AC5
B
173 177Right-handed 310
Helix 24
AC6
B
199 206Right-handed 310
Helix 25
AC7
B
221 225Right-handed 310
Helix 26
AC8
B
230 247Right-handed alpha
Helix 27
AC9
B
272 279Right-handed alpha
Helix 28
AD1
B
282 309Right-handed alpha
Helix 29
AD2
B
311 313Right-handed 310
Helix 30
AD3
B
352 356Right-handed alpha
Helix 31
AD4
B
382 391Right-handed alpha
Helix 32
AD5
B
407 412Right-handed alpha
Helix 33
AD6
B
479 497Right-handed alpha
Helix 34
AD7
B
513 517Right-handed 310
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There are 10 sheets in PDB entry 6USS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
159 164parallel
Strand 3
A
253 258parallel
Strand 4
A
35 41parallel
Strand 5
A
315 321parallel
Strand 6
A
357 363anti-parallel
Strand 7
A
77 83anti-parallel
Strand 8
A
372 374parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
159 164parallel
Strand 3
A
253 258parallel
Strand 4
A
35 41parallel
Strand 5
A
315 321parallel
Strand 6
A
357 363anti-parallel
Strand 7
A
77 83anti-parallel
Strand 8
A
378 379parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
503 504anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
143 145parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 427first strand
Strand 2
A
441 446anti-parallel
Strand 3
A
449 454anti-parallel
Strand 4
A
460 464anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 187first strand
Strand 2
B
159 164parallel
Strand 3
B
253 258parallel
Strand 4
B
35 41parallel
Strand 5
B
315 321parallel
Strand 6
B
357 363anti-parallel
Strand 7
B
77 83anti-parallel
Strand 8
B
372 374parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 187first strand
Strand 2
B
159 164parallel
Strand 3
B
253 258parallel
Strand 4
B
35 41parallel
Strand 5
B
315 321parallel
Strand 6
B
357 363anti-parallel
Strand 7
B
77 83anti-parallel
Strand 8
B
378 379parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
503 504anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 135first strand
Strand 2
B
144 145parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
422 427first strand
Strand 2
B
441 446anti-parallel
Strand 3
B
449 454anti-parallel
Strand 4
B
460 464anti-parallel
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