Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UT3 entry

There are 6 chains in PDB entry 6UT3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 196	ALA 575
B	TYR 198	ILE 584
C	PHE 199	ILE 584
D	PHE 199	ILE 584
E	ASP 202	SER 585
F	ASP 202	PRO 436

There are103 helices in PDB entry 6UT3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	223	231	Right-handed alpha
Helix 2	AA2	A	281	289	Right-handed alpha
Helix 3	AA3	A	306	312	Right-handed alpha
Helix 4	AA4	A	321	326	Right-handed alpha
Helix 5	AA5	A	331	339	Right-handed alpha
Helix 6	AA6	A	340	344	Right-handed 310
Helix 7	AA7	A	362	367	Right-handed alpha
Helix 8	AA8	A	487	492	Right-handed alpha
Helix 9	AA9	A	501	505	Right-handed 310
Helix 10	AB1	A	522	526	Right-handed 310
Helix 11	AB2	A	532	537	Right-handed alpha
Helix 12	AB3	B	199	203	Right-handed alpha
Helix 13	AB4	B	220	226	Right-handed alpha
Helix 14	AB5	B	227	232	Right-handed alpha
Helix 15	AB6	B	276	280	Right-handed 310
Helix 16	AB7	B	302	311	Right-handed alpha
Helix 17	AB8	B	320	336	Right-handed alpha
Helix 18	AB9	B	358	361	Right-handed 310
Helix 19	AC1	B	362	367	Right-handed alpha
Helix 20	AC2	B	370	375	Right-handed 310
Helix 21	AC3	B	420	425	Right-handed alpha
Helix 22	AC4	B	435	439	Right-handed 310
Helix 23	AC5	B	440	449	Right-handed alpha
Helix 24	AC6	B	460	471	Right-handed alpha
Helix 25	AC7	B	476	493	Right-handed alpha
Helix 26	AC8	B	494	498	Right-handed 310
Helix 27	AC9	B	500	504	Right-handed 310
Helix 28	AD1	B	509	520	Right-handed alpha
Helix 29	AD2	B	520	529	Right-handed alpha
Helix 30	AD3	B	532	540	Right-handed alpha
Helix 31	AD4	B	573	582	Right-handed alpha
Helix 32	AD5	C	200	208	Right-handed alpha
Helix 33	AD6	C	220	233	Right-handed alpha
Helix 34	AD7	C	277	294	Right-handed alpha
Helix 35	AD8	C	302	312	Right-handed alpha
Helix 36	AD9	C	318	336	Right-handed alpha
Helix 37	AE1	C	358	361	Right-handed 310
Helix 38	AE2	C	362	367	Right-handed alpha
Helix 39	AE3	C	369	374	Right-handed alpha
Helix 40	AE4	C	420	427	Right-handed alpha
Helix 41	AE5	C	435	439	Right-handed 310
Helix 42	AE6	C	440	449	Right-handed alpha
Helix 43	AE7	C	454	457	Right-handed 310
Helix 44	AE8	C	458	470	Right-handed alpha
Helix 45	AE9	C	476	493	Right-handed alpha
Helix 46	AF1	C	494	498	Right-handed 310
Helix 47	AF2	C	500	505	Right-handed 310
Helix 48	AF3	C	509	520	Right-handed alpha
Helix 49	AF4	C	521	529	Right-handed alpha
Helix 50	AF5	C	532	540	Right-handed alpha
Helix 51	AF6	C	573	582	Right-handed alpha
Helix 52	AF7	D	200	208	Right-handed alpha
Helix 53	AF8	D	221	231	Right-handed alpha
Helix 54	AF9	D	277	294	Right-handed alpha
Helix 55	AG1	D	300	313	Right-handed alpha
Helix 56	AG2	D	318	337	Right-handed alpha
Helix 57	AG3	D	357	361	Right-handed 310
Helix 58	AG4	D	362	367	Right-handed alpha
Helix 59	AG5	D	369	374	Right-handed alpha
Helix 60	AG6	D	391	394	Right-handed 310
Helix 61	AG7	D	420	427	Right-handed alpha
Helix 62	AG8	D	435	439	Right-handed 310
Helix 63	AG9	D	440	449	Right-handed alpha
Helix 64	AH1	D	454	471	Right-handed alpha
Helix 65	AH2	D	476	493	Right-handed alpha
Helix 66	AH3	D	494	498	Right-handed 310
Helix 67	AH4	D	509	520	Right-handed alpha
Helix 68	AH5	D	520	529	Right-handed alpha
Helix 69	AH6	D	532	540	Right-handed alpha
Helix 70	AH7	D	573	584	Right-handed alpha
Helix 71	AH8	E	203	209	Right-handed alpha
Helix 72	AH9	E	220	234	Right-handed alpha
Helix 73	AI1	E	252	257	Right-handed alpha
Helix 74	AI2	E	277	291	Right-handed alpha
Helix 75	AI3	E	302	307	Right-handed alpha
Helix 76	AI4	E	308	313	Right-handed alpha
Helix 77	AI5	E	320	337	Right-handed alpha
Helix 78	AI6	E	357	361	Right-handed 310
Helix 79	AI7	E	362	367	Right-handed alpha
Helix 80	AI8	E	369	374	Right-handed alpha
Helix 81	AI9	E	375	379	Right-handed 310
Helix 82	AJ1	E	420	425	Right-handed alpha
Helix 83	AJ2	E	435	439	Right-handed 310
Helix 84	AJ3	E	440	449	Right-handed alpha
Helix 85	AJ4	E	455	471	Right-handed alpha
Helix 86	AJ5	E	476	493	Right-handed alpha
Helix 87	AJ6	E	494	498	Right-handed 310
Helix 88	AJ7	E	500	504	Right-handed 310
Helix 89	AJ8	E	509	520	Right-handed alpha
Helix 90	AJ9	E	520	529	Right-handed alpha
Helix 91	AK1	E	532	540	Right-handed alpha
Helix 92	AK2	E	572	585	Right-handed alpha
Helix 93	AK3	F	203	208	Right-handed alpha
Helix 94	AK4	F	221	231	Right-handed alpha
Helix 95	AK5	F	252	257	Right-handed alpha
Helix 96	AK6	F	277	293	Right-handed alpha
Helix 97	AK7	F	295	300	Right-handed alpha
Helix 98	AK8	F	301	313	Right-handed alpha
Helix 99	AK9	F	318	339	Right-handed alpha
Helix 100	AL1	F	362	367	Right-handed alpha
Helix 101	AL2	F	369	374	Right-handed alpha
Helix 102	AL3	F	375	379	Right-handed 310
Helix 103	AL4	F	420	427	Right-handed alpha

There are 19 sheets in PDB entry 6UT3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	246	first strand
Strand 2	B	352	356	parallel
Strand 3	B	404	410	parallel
Strand 4	B	210	215	parallel
Strand 5	B	427	431	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	260	first strand
Strand 2	B	271	274	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	390	first strand
Strand 2	B	394	397	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	552	558	first strand
Strand 2	B	564	568	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	246	first strand
Strand 2	C	351	356	parallel
Strand 3	C	403	408	parallel
Strand 4	C	210	214	parallel
Strand 5	C	428	431	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	262	first strand
Strand 2	C	272	276	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	389	first strand
Strand 2	C	396	397	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	552	554	first strand
Strand 2	C	566	568	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	246	first strand
Strand 2	D	351	356	parallel
Strand 3	D	403	410	parallel
Strand 4	D	210	215	parallel
Strand 5	D	428	431	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	261	first strand
Strand 2	D	273	276	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	388	389	first strand
Strand 2	D	396	397	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	558	first strand
Strand 2	D	564	568	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	242	246	first strand
Strand 2	E	351	356	parallel
Strand 3	E	403	410	parallel
Strand 4	E	210	215	parallel
Strand 5	E	429	431	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	258	261	first strand
Strand 2	E	273	276	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	388	389	first strand
Strand 2	E	396	397	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	552	555	first strand
Strand 2	E	565	568	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	243	246	first strand
Strand 2	F	351	356	parallel
Strand 3	F	403	408	parallel
Strand 4	F	210	214	parallel
Strand 5	F	428	431	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	262	first strand
Strand 2	F	272	276	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	388	389	first strand
Strand 2	F	396	397	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UT3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT3