Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UT4 entry

There are 6 chains in PDB entry 6UT4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 198	ILE 584
B	GLU 196	ILE 584
C	LYS 195	ILE 584
D	GLU 196	ILE 584
E	LYS 195	ILE 584
F	LYS 195	ILE 584

There are116 helices in PDB entry 6UT4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	199	204	Right-handed alpha
Helix 2	AA2	A	220	231	Right-handed alpha
Helix 3	AA3	A	252	257	Right-handed alpha
Helix 4	AA4	A	277	290	Right-handed alpha
Helix 5	AA5	A	300	312	Right-handed alpha
Helix 6	AA6	A	318	336	Right-handed alpha
Helix 7	AA7	A	362	367	Right-handed alpha
Helix 8	AA8	A	420	424	Right-handed 310
Helix 9	AA9	A	435	439	Right-handed 310
Helix 10	AB1	A	440	451	Right-handed alpha
Helix 11	AB2	A	455	469	Right-handed alpha
Helix 12	AB3	A	476	491	Right-handed alpha
Helix 13	AB4	A	494	498	Right-handed 310
Helix 14	AB5	A	500	504	Right-handed 310
Helix 15	AB6	A	509	519	Right-handed alpha
Helix 16	AB7	A	520	529	Right-handed alpha
Helix 17	AB8	A	532	540	Right-handed alpha
Helix 18	AB9	A	573	582	Right-handed alpha
Helix 19	AC1	B	197	208	Right-handed alpha
Helix 20	AC2	B	221	234	Right-handed alpha
Helix 21	AC3	B	252	257	Right-handed alpha
Helix 22	AC4	B	277	294	Right-handed alpha
Helix 23	AC5	B	300	311	Right-handed alpha
Helix 24	AC6	B	318	336	Right-handed alpha
Helix 25	AC7	B	337	339	Right-handed 310
Helix 26	AC8	B	362	367	Right-handed alpha
Helix 27	AC9	B	369	374	Right-handed 310
Helix 28	AD1	B	420	425	Right-handed alpha
Helix 29	AD2	B	435	439	Right-handed 310
Helix 30	AD3	B	440	447	Right-handed alpha
Helix 31	AD4	B	454	456	Right-handed 310
Helix 32	AD5	B	457	470	Right-handed alpha
Helix 33	AD6	B	476	491	Right-handed alpha
Helix 34	AD7	B	500	504	Right-handed 310
Helix 35	AD8	B	509	521	Right-handed alpha
Helix 36	AD9	B	521	529	Right-handed alpha
Helix 37	AE1	B	532	540	Right-handed alpha
Helix 38	AE2	B	573	582	Right-handed alpha
Helix 39	AE3	C	196	209	Right-handed alpha
Helix 40	AE4	C	221	233	Right-handed alpha
Helix 41	AE5	C	252	257	Right-handed alpha
Helix 42	AE6	C	277	294	Right-handed alpha
Helix 43	AE7	C	300	313	Right-handed alpha
Helix 44	AE8	C	318	336	Right-handed alpha
Helix 45	AE9	C	340	346	Right-handed alpha
Helix 46	AF1	C	357	361	Right-handed 310
Helix 47	AF2	C	362	367	Right-handed alpha
Helix 48	AF3	C	369	374	Right-handed alpha
Helix 49	AF4	C	420	425	Right-handed alpha
Helix 50	AF5	C	435	439	Right-handed 310
Helix 51	AF6	C	440	449	Right-handed alpha
Helix 52	AF7	C	454	460	Right-handed 310
Helix 53	AF8	C	462	471	Right-handed alpha
Helix 54	AF9	C	476	491	Right-handed alpha
Helix 55	AG1	C	509	521	Right-handed alpha
Helix 56	AG2	C	521	529	Right-handed alpha
Helix 57	AG3	C	532	540	Right-handed alpha
Helix 58	AG4	C	573	584	Right-handed alpha
Helix 59	AG5	D	197	208	Right-handed alpha
Helix 60	AG6	D	220	234	Right-handed alpha
Helix 61	AG7	D	252	257	Right-handed alpha
Helix 62	AG8	D	277	294	Right-handed alpha
Helix 63	AG9	D	300	312	Right-handed alpha
Helix 64	AH1	D	318	336	Right-handed alpha
Helix 65	AH2	D	340	345	Right-handed alpha
Helix 66	AH3	D	357	361	Right-handed 310
Helix 67	AH4	D	362	367	Right-handed alpha
Helix 68	AH5	D	369	374	Right-handed alpha
Helix 69	AH6	D	375	379	Right-handed 310
Helix 70	AH7	D	435	440	Right-handed 310
Helix 71	AH8	D	442	449	Right-handed alpha
Helix 72	AH9	D	456	471	Right-handed alpha
Helix 73	AI1	D	476	493	Right-handed alpha
Helix 74	AI2	D	494	498	Right-handed 310
Helix 75	AI3	D	509	520	Right-handed alpha
Helix 76	AI4	D	521	529	Right-handed alpha
Helix 77	AI5	D	532	540	Right-handed alpha
Helix 78	AI6	D	573	584	Right-handed alpha
Helix 79	AI7	E	196	209	Right-handed alpha
Helix 80	AI8	E	220	233	Right-handed alpha
Helix 81	AI9	E	277	291	Right-handed alpha
Helix 82	AJ1	E	300	312	Right-handed alpha
Helix 83	AJ2	E	321	337	Right-handed alpha
Helix 84	AJ3	E	357	361	Right-handed 310
Helix 85	AJ4	E	362	367	Right-handed alpha
Helix 86	AJ5	E	369	374	Right-handed alpha
Helix 87	AJ6	E	422	426	Right-handed 310
Helix 88	AJ7	E	435	439	Right-handed 310
Helix 89	AJ8	E	440	452	Right-handed alpha
Helix 90	AJ9	E	456	472	Right-handed alpha
Helix 91	AK1	E	476	493	Right-handed alpha
Helix 92	AK2	E	500	504	Right-handed 310
Helix 93	AK3	E	509	520	Right-handed alpha
Helix 94	AK4	E	521	529	Right-handed alpha
Helix 95	AK5	E	532	540	Right-handed alpha
Helix 96	AK6	E	573	584	Right-handed alpha
Helix 97	AK7	F	196	209	Right-handed alpha
Helix 98	AK8	F	220	233	Right-handed alpha
Helix 99	AK9	F	277	293	Right-handed alpha
Helix 100	AL1	F	300	313	Right-handed alpha
Helix 101	AL2	F	318	336	Right-handed alpha
Helix 102	AL3	F	340	345	Right-handed alpha
Helix 103	AL4	F	357	361	Right-handed 310
Helix 104	AL5	F	362	368	Right-handed alpha
Helix 105	AL6	F	369	374	Right-handed alpha
Helix 106	AL7	F	420	427	Right-handed alpha
Helix 107	AL8	F	435	439	Right-handed 310
Helix 108	AL9	F	440	450	Right-handed alpha
Helix 109	AM1	F	455	469	Right-handed alpha
Helix 110	AM2	F	476	493	Right-handed alpha
Helix 111	AM3	F	494	498	Right-handed 310
Helix 112	AM4	F	500	504	Right-handed 310
Helix 113	AM5	F	509	521	Right-handed alpha
Helix 114	AM6	F	521	529	Right-handed alpha
Helix 115	AM7	F	532	540	Right-handed alpha
Helix 116	AM8	F	573	582	Right-handed alpha

There are 24 sheets in PDB entry 6UT4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	246	first strand
Strand 2	A	351	356	parallel
Strand 3	A	403	410	parallel
Strand 4	A	210	215	parallel
Strand 5	A	428	431	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	264	first strand
Strand 2	A	270	276	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	388	389	first strand
Strand 2	A	396	397	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	552	554	first strand
Strand 2	A	566	568	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	246	first strand
Strand 2	B	351	356	parallel
Strand 3	B	403	408	parallel
Strand 4	B	211	214	parallel
Strand 5	B	428	431	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	262	first strand
Strand 2	B	272	276	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	389	first strand
Strand 2	B	396	397	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	552	554	first strand
Strand 2	B	566	568	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	246	first strand
Strand 2	C	351	356	parallel
Strand 3	C	403	410	parallel
Strand 4	C	210	215	parallel
Strand 5	C	428	431	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	262	first strand
Strand 2	C	272	276	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	389	first strand
Strand 2	C	396	397	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	552	554	first strand
Strand 2	C	566	568	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	246	first strand
Strand 2	D	351	356	parallel
Strand 3	D	403	410	parallel
Strand 4	D	210	215	parallel
Strand 5	D	428	431	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	262	first strand
Strand 2	D	272	276	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	388	389	first strand
Strand 2	D	396	397	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	554	first strand
Strand 2	D	566	568	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	242	246	first strand
Strand 2	E	351	356	parallel
Strand 3	E	403	410	parallel
Strand 4	E	210	215	parallel
Strand 5	E	428	431	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	258	263	first strand
Strand 2	E	271	276	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	388	389	first strand
Strand 2	E	396	397	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	552	554	first strand
Strand 2	E	566	568	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	242	246	first strand
Strand 2	F	351	356	parallel
Strand 3	F	403	410	parallel
Strand 4	F	210	215	parallel
Strand 5	F	428	431	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	265	first strand
Strand 2	F	269	276	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	388	389	first strand
Strand 2	F	396	397	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	552	554	first strand
Strand 2	F	566	568	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UT4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT4