Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UT8 entry

There are 7 chains in PDB entry 6UT8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 195	ILE 584
B	ASN 193	ILE 584
C	LYS 195	ILE 584
D	ILE 194	ILE 584
E	ASN 193	ILE 584
F	ASN 193	ILE 584
G	THR 5	ILE 453

There are124 helices in PDB entry 6UT8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	197	208	Right-handed alpha
Helix 2	AA2	A	220	234	Right-handed alpha
Helix 3	AA3	A	252	257	Right-handed alpha
Helix 4	AA4	A	278	291	Right-handed alpha
Helix 5	AA5	A	295	299	Right-handed 310
Helix 6	AA6	A	300	313	Right-handed alpha
Helix 7	AA7	A	318	337	Right-handed alpha
Helix 8	AA8	A	362	367	Right-handed alpha
Helix 9	AA9	A	368	374	Right-handed 310
Helix 10	AB1	A	415	419	Right-handed 310
Helix 11	AB2	A	435	439	Right-handed 310
Helix 12	AB3	A	440	449	Right-handed alpha
Helix 13	AB4	A	453	471	Right-handed alpha
Helix 14	AB5	A	476	490	Right-handed alpha
Helix 15	AB6	A	494	498	Right-handed 310
Helix 16	AB7	A	503	507	Right-handed 310
Helix 17	AB8	A	509	520	Right-handed alpha
Helix 18	AB9	A	521	529	Right-handed alpha
Helix 19	AC1	A	533	540	Right-handed alpha
Helix 20	AC2	A	573	581	Right-handed alpha
Helix 21	AC3	A	582	584	Right-handed 310
Helix 22	AC4	B	194	207	Right-handed alpha
Helix 23	AC5	B	220	234	Right-handed alpha
Helix 24	AC6	B	252	257	Right-handed alpha
Helix 25	AC7	B	278	293	Right-handed alpha
Helix 26	AC8	B	300	312	Right-handed alpha
Helix 27	AC9	B	321	337	Right-handed alpha
Helix 28	AD1	B	362	367	Right-handed alpha
Helix 29	AD2	B	371	379	Right-handed 310
Helix 30	AD3	B	435	439	Right-handed 310
Helix 31	AD4	B	440	452	Right-handed alpha
Helix 32	AD5	B	455	471	Right-handed alpha
Helix 33	AD6	B	476	491	Right-handed alpha
Helix 34	AD7	B	503	507	Right-handed 310
Helix 35	AD8	B	509	520	Right-handed alpha
Helix 36	AD9	B	521	526	Right-handed alpha
Helix 37	AE1	B	532	540	Right-handed alpha
Helix 38	AE2	B	573	582	Right-handed alpha
Helix 39	AE3	C	197	206	Right-handed alpha
Helix 40	AE4	C	220	234	Right-handed alpha
Helix 41	AE5	C	279	292	Right-handed alpha
Helix 42	AE6	C	300	310	Right-handed alpha
Helix 43	AE7	C	318	337	Right-handed alpha
Helix 44	AE8	C	340	345	Right-handed alpha
Helix 45	AE9	C	362	367	Right-handed alpha
Helix 46	AF1	C	375	379	Right-handed 310
Helix 47	AF2	C	422	427	Right-handed alpha
Helix 48	AF3	C	435	439	Right-handed 310
Helix 49	AF4	C	440	451	Right-handed alpha
Helix 50	AF5	C	454	471	Right-handed alpha
Helix 51	AF6	C	476	493	Right-handed alpha
Helix 52	AF7	C	509	520	Right-handed alpha
Helix 53	AF8	C	521	529	Right-handed alpha
Helix 54	AF9	C	532	540	Right-handed alpha
Helix 55	AG1	C	573	579	Right-handed alpha
Helix 56	AG2	D	195	208	Right-handed alpha
Helix 57	AG3	D	221	234	Right-handed alpha
Helix 58	AG4	D	279	291	Right-handed alpha
Helix 59	AG5	D	302	310	Right-handed alpha
Helix 60	AG6	D	318	336	Right-handed alpha
Helix 61	AG7	D	341	346	Right-handed alpha
Helix 62	AG8	D	362	367	Right-handed alpha
Helix 63	AG9	D	368	372	Right-handed 310
Helix 64	AH1	D	435	439	Right-handed 310
Helix 65	AH2	D	441	449	Right-handed alpha
Helix 66	AH3	D	456	469	Right-handed alpha
Helix 67	AH4	D	476	491	Right-handed alpha
Helix 68	AH5	D	503	507	Right-handed 310
Helix 69	AH6	D	509	518	Right-handed alpha
Helix 70	AH7	D	521	529	Right-handed alpha
Helix 71	AH8	D	532	540	Right-handed alpha
Helix 72	AH9	D	573	581	Right-handed alpha
Helix 73	AI1	E	198	209	Right-handed alpha
Helix 74	AI2	E	221	234	Right-handed alpha
Helix 75	AI3	E	279	291	Right-handed alpha
Helix 76	AI4	E	300	313	Right-handed alpha
Helix 77	AI5	E	318	336	Right-handed alpha
Helix 78	AI6	E	357	361	Right-handed 310
Helix 79	AI7	E	362	367	Right-handed alpha
Helix 80	AI8	E	368	372	Right-handed 310
Helix 81	AI9	E	420	425	Right-handed alpha
Helix 82	AJ1	E	435	439	Right-handed 310
Helix 83	AJ2	E	440	452	Right-handed alpha
Helix 84	AJ3	E	456	471	Right-handed alpha
Helix 85	AJ4	E	476	491	Right-handed alpha
Helix 86	AJ5	E	503	507	Right-handed 310
Helix 87	AJ6	E	509	519	Right-handed alpha
Helix 88	AJ7	E	521	529	Right-handed alpha
Helix 89	AJ8	E	532	540	Right-handed alpha
Helix 90	AJ9	E	573	581	Right-handed alpha
Helix 91	AK1	F	196	206	Right-handed alpha
Helix 92	AK2	F	220	233	Right-handed alpha
Helix 93	AK3	F	252	257	Right-handed alpha
Helix 94	AK4	F	279	294	Right-handed alpha
Helix 95	AK5	F	300	312	Right-handed alpha
Helix 96	AK6	F	318	337	Right-handed alpha
Helix 97	AK7	F	340	344	Right-handed 310
Helix 98	AK8	F	362	367	Right-handed alpha
Helix 99	AK9	F	421	426	Right-handed alpha
Helix 100	AL1	F	435	439	Right-handed 310
Helix 101	AL2	F	440	451	Right-handed alpha
Helix 102	AL3	F	453	471	Right-handed alpha
Helix 103	AL4	F	476	493	Right-handed alpha
Helix 104	AL5	F	503	507	Right-handed 310
Helix 105	AL6	F	509	518	Right-handed alpha
Helix 106	AL7	F	521	529	Right-handed alpha
Helix 107	AL8	F	535	540	Right-handed alpha
Helix 108	AL9	F	573	581	Right-handed alpha
Helix 109	AM1	G	23	41	Right-handed alpha
Helix 110	AM2	G	57	61	Right-handed 310
Helix 111	AM3	G	110	123	Right-handed alpha
Helix 112	AM4	G	129	134	Right-handed alpha
Helix 113	AM5	G	144	162	Right-handed alpha
Helix 114	AM6	G	185	190	Right-handed alpha
Helix 115	AM7	G	192	196	Right-handed 310
Helix 116	AM8	G	210	225	Right-handed alpha
Helix 117	AM9	G	231	243	Right-handed alpha
Helix 118	AN1	G	254	259	Right-handed alpha
Helix 119	AN2	G	265	267	Right-handed 310
Helix 120	AN3	G	268	279	Right-handed alpha
Helix 121	AN4	G	298	314	Right-handed alpha
Helix 122	AN5	G	360	364	Right-handed 310
Helix 123	AN6	G	366	379	Right-handed alpha
Helix 124	AN7	G	440	453	Right-handed alpha

There are 30 sheets in PDB entry 6UT8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	246	first strand
Strand 2	A	352	356	parallel
Strand 3	A	404	410	parallel
Strand 4	A	210	215	parallel
Strand 5	A	429	431	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	263	first strand
Strand 2	A	271	276	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	388	389	first strand
Strand 2	A	396	397	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	552	553	first strand
Strand 2	A	567	568	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	246	first strand
Strand 2	B	352	356	parallel
Strand 3	B	405	410	parallel
Strand 4	B	210	215	parallel
Strand 5	B	428	431	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	262	first strand
Strand 2	B	272	276	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	389	first strand
Strand 2	B	396	397	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	552	554	first strand
Strand 2	B	566	568	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	246	first strand
Strand 2	C	352	356	parallel
Strand 3	C	404	408	parallel
Strand 4	C	210	214	parallel
Strand 5	C	428	431	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	263	first strand
Strand 2	C	271	276	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	389	first strand
Strand 2	C	396	397	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	552	554	first strand
Strand 2	C	566	568	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	244	first strand
Strand 2	D	352	356	parallel
Strand 3	D	407	410	parallel
Strand 4	D	211	215	parallel
Strand 5	D	428	431	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	262	first strand
Strand 2	D	272	276	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	388	389	first strand
Strand 2	D	396	397	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	554	first strand
Strand 2	D	566	568	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	210	212	first strand
Strand 2	E	403	407	parallel
Strand 3	E	351	356	parallel
Strand 4	E	242	246	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	258	263	first strand
Strand 2	E	271	276	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	388	389	first strand
Strand 2	E	396	397	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	552	554	first strand
Strand 2	E	566	568	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	211	214	first strand
Strand 2	F	428	431	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	245	246	first strand
Strand 2	F	352	356	parallel
Strand 3	F	404	408	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	260	first strand
Strand 2	F	274	276	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	263	264	first strand
Strand 2	F	270	271	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	388	389	first strand
Strand 2	F	396	397	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	552	554	first strand
Strand 2	F	566	568	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	6	10	first strand
Strand 2	G	86	91	parallel
Strand 3	G	77	83	anti-parallel
Strand 4	G	293	297	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	14	16	first strand
Strand 2	G	71	74	anti-parallel
Strand 3	G	65	67	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	168	176	first strand
Strand 2	G	199	207	anti-parallel
Strand 3	G	182	183	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	318	321	first strand
Strand 2	G	341	344	anti-parallel
Strand 3	G	351	353	anti-parallel
Strand 4	G	395	402	parallel
Strand 5	G	425	431	parallel
Strand 6	G	415	417	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UT8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT8