Analysis of interatomic Contacts of Structural Units in PDB entry:
6UT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UT9 entry

There is 1 chain in PDB entry 6UT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1GLY 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6UT9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
129 133Right-handed 310
Helix 2
AA2
A
148 159Right-handed alpha
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There are 3 sheets in PDB entry 6UT9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
140 145anti-parallel
Strand 3
A
17 22anti-parallel
Strand 4
A
100 106anti-parallel
Strand 5
A
109 116anti-parallel
Strand 6
A
89 95parallel
Strand 7
A
75 81anti-parallel
Strand 8
A
39 45anti-parallel
Strand 9
A
27 33anti-parallel
Strand 10
A
134 137anti-parallel
Strand 11
A
9 11anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
140 145anti-parallel
Strand 3
A
17 22anti-parallel
Strand 4
A
100 106anti-parallel
Strand 5
A
109 116anti-parallel
Strand 6
A
121 126anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 58first strand
Strand 2
A
61 69anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il