Analysis of interatomic Contacts of Structural Units in PDB entry:
6UTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UTC entry

There is 1 chain in PDB entry 6UTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 200LYS 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6UTC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
222 224Right-handed 310
Helix 2
AA2
A
225 239Right-handed alpha
Helix 3
AA3
A
240 245Right-handed 310
Helix 4
AA4
A
266 273Right-handed 310
Helix 5
AA5
A
284 289Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6UTC.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
202 208first strand
Strand 2
A
211 216anti-parallel
Strand 3
A
248 253parallel
Strand 4
A
258 264anti-parallel
Strand 5
A
274 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il