Analysis of interatomic Contacts of Structural Units in PDB entry:
6UTU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6UTU entry

There are 9 chains in PDB entry 6UTU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 40	LEU 125
B	GLU 44	LYS 205
C	VAL 44	GLN 315
D	ARG 39	GLY 126
E	GLN 45	LYS 205
F	VAL 44	MET 313
G	GLU 41	LEU 125
H	GLN 45	LEU 204
I	VAL 44	MET 313

There are 42 helices in PDB entry 6UTU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	59	Right-handed alpha
Helix 2	AA2	B	45	63	Right-handed alpha
Helix 3	AA3	B	169	176	Right-handed alpha
Helix 4	AA4	C	45	65	Right-handed alpha
Helix 5	AA5	C	105	109	Right-handed 310
Helix 6	AA6	C	122	136	Right-handed alpha
Helix 7	AA7	C	139	155	Right-handed alpha
Helix 8	AA8	C	167	173	Right-handed alpha
Helix 9	AA9	C	187	194	Right-handed 310
Helix 10	AB1	C	197	205	Right-handed alpha
Helix 11	AB2	C	223	232	Right-handed alpha
Helix 12	AB3	C	234	248	Right-handed alpha
Helix 13	AB4	C	252	262	Right-handed alpha
Helix 14	AB5	D	41	58	Right-handed alpha
Helix 15	AB6	E	46	62	Right-handed alpha
Helix 16	AB7	E	169	176	Right-handed alpha
Helix 17	AB8	F	45	65	Right-handed alpha
Helix 18	AB9	F	105	109	Right-handed 310
Helix 19	AC1	F	113	116	Right-handed 310
Helix 20	AC2	F	122	136	Right-handed alpha
Helix 21	AC3	F	139	155	Right-handed alpha
Helix 22	AC4	F	167	172	Right-handed alpha
Helix 23	AC5	F	187	194	Right-handed 310
Helix 24	AC6	F	197	205	Right-handed alpha
Helix 25	AC7	F	223	232	Right-handed alpha
Helix 26	AC8	F	234	245	Right-handed alpha
Helix 27	AC9	F	252	260	Right-handed alpha
Helix 28	AD1	G	42	58	Right-handed alpha
Helix 29	AD2	H	46	62	Right-handed alpha
Helix 30	AD3	H	169	174	Right-handed alpha
Helix 31	AD4	I	45	64	Right-handed alpha
Helix 32	AD5	I	82	86	Right-handed 310
Helix 33	AD6	I	105	109	Right-handed 310
Helix 34	AD7	I	113	116	Right-handed 310
Helix 35	AD8	I	122	136	Right-handed alpha
Helix 36	AD9	I	139	155	Right-handed alpha
Helix 37	AE1	I	167	172	Right-handed alpha
Helix 38	AE2	I	187	194	Right-handed 310
Helix 39	AE3	I	197	205	Right-handed alpha
Helix 40	AE4	I	223	231	Right-handed alpha
Helix 41	AE5	I	234	245	Right-handed alpha
Helix 42	AE6	I	254	265	Right-handed alpha

There are 22 sheets in PDB entry 6UTU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	81	85	anti-parallel
Strand 3	A	95	102	anti-parallel
Strand 4	A	119	125	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	76	77	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	83	first strand
Strand 2	B	89	94	anti-parallel
Strand 3	B	109	116	anti-parallel
Strand 4	B	119	124	anti-parallel
Strand 5	B	137	143	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	160	first strand
Strand 2	B	145	153	anti-parallel
Strand 3	B	180	187	anti-parallel
Strand 4	B	191	198	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	104	first strand
Strand 2	C	278	285	anti-parallel
Strand 3	C	292	300	anti-parallel
Strand 4	C	306	312	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	208	209	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	C	120	121	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	218	first strand
Strand 2	C	272	273	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	75	first strand
Strand 2	D	78	86	anti-parallel
Strand 3	D	95	103	anti-parallel
Strand 4	D	119	125	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	70	first strand
Strand 2	E	76	77	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	80	83	first strand
Strand 2	E	89	94	anti-parallel
Strand 3	E	109	116	anti-parallel
Strand 4	E	119	125	anti-parallel
Strand 5	E	137	142	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	160	first strand
Strand 2	E	145	153	anti-parallel
Strand 3	E	180	187	anti-parallel
Strand 4	E	193	198	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	100	104	first strand
Strand 2	F	278	284	anti-parallel
Strand 3	F	294	300	anti-parallel
Strand 4	F	306	312	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	110	111	first strand
Strand 2	F	208	209	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	217	218	first strand
Strand 2	F	272	273	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	70	74	first strand
Strand 2	G	79	83	anti-parallel
Strand 3	G	100	102	anti-parallel
Strand 4	G	119	120	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	69	70	first strand
Strand 2	H	76	77	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	80	83	first strand
Strand 2	H	89	94	anti-parallel
Strand 3	H	109	115	anti-parallel
Strand 4	H	120	125	anti-parallel
Strand 5	H	137	142	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	145	153	first strand
Strand 2	H	180	187	anti-parallel
Strand 3	H	191	198	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	100	104	first strand
Strand 2	I	278	284	anti-parallel
Strand 3	I	293	300	anti-parallel
Strand 4	I	306	312	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	110	111	first strand
Strand 2	I	208	209	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	217	218	first strand
Strand 2	I	272	273	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6UTU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6UTU