Analysis of interatomic Contacts of Structural Units in PDB entry:
6UUK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UUK entry

There are 2 chains in PDB entry 6UUK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 74PRO 364
B
 THR 72THR 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6UUK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 98Right-handed alpha
Helix 2
AA2
A
118 130Right-handed alpha
Helix 3
AA3
A
155 162Right-handed alpha
Helix 4
AA4
A
169 171Right-handed 310
Helix 5
AA5
A
172 182Right-handed alpha
Helix 6
AA6
A
191 196Right-handed alpha
Helix 7
AA7
A
202 215Right-handed alpha
Helix 8
AA8
A
241 248Right-handed alpha
Helix 9
AA9
A
269 283Right-handed alpha
Helix 10
AB1
A
284 289Right-handed alpha
Helix 11
AB2
A
303 307Right-handed 310
Helix 12
AB3
A
310 322Right-handed alpha
Helix 13
AB4
B
84 98Right-handed alpha
Helix 14
AB5
B
118 130Right-handed alpha
Helix 15
AB6
B
147 151Right-handed 310
Helix 16
AB7
B
155 161Right-handed alpha
Helix 17
AB8
B
169 171Right-handed 310
Helix 18
AB9
B
172 182Right-handed alpha
Helix 19
AC1
B
191 196Right-handed alpha
Helix 20
AC2
B
202 215Right-handed alpha
Helix 21
AC3
B
241 247Right-handed alpha
Helix 22
AC4
B
269 283Right-handed alpha
Helix 23
AC5
B
303 307Right-handed 310
Helix 24
AC6
B
310 322Right-handed alpha
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There are 4 sheets in PDB entry 6UUK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
75 77parallel
Strand 3
A
137 140parallel
Strand 4
A
165 168parallel
Strand 5
A
186 188parallel
Strand 6
A
341 343anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 223first strand
Strand 2
A
355 361anti-parallel
Strand 3
A
346 351anti-parallel
Strand 4
A
230 240anti-parallel
Strand 5
A
259 266parallel
Strand 6
A
291 298parallel
Strand 7
A
326 328parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
73 77parallel
Strand 3
B
137 140parallel
Strand 4
B
165 168parallel
Strand 5
B
186 188parallel
Strand 6
B
341 343anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 223first strand
Strand 2
B
355 361anti-parallel
Strand 3
B
346 351anti-parallel
Strand 4
B
231 240anti-parallel
Strand 5
B
260 266parallel
Strand 6
B
291 298parallel
Strand 7
B
326 328parallel
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