Analysis of interatomic Contacts of Structural Units in PDB entry:
6UUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UUQ entry

There are 2 chains in PDB entry 6UUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 26CYS 336
B
 THR 153CYS 161
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6UUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 35Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
57 74Right-handed alpha
Helix 4
AA4
A
94 106Right-handed alpha
Helix 5
AA5
A
125 140Right-handed alpha
Helix 6
AA6
A
153 160Right-handed alpha
Helix 7
AA7
A
161 170Right-handed alpha
Helix 8
AA8
A
171 184Right-handed alpha
Helix 9
AA9
A
208 214Right-handed alpha
Helix 10
AB1
A
225 233Right-handed alpha
Helix 11
AB2
A
261 272Right-handed alpha
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There are 4 sheets in PDB entry 6UUQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
188 191parallel
Strand 3
A
195 197anti-parallel
Strand 4
A
276 279parallel
Strand 5
A
302 305parallel
Strand 6
A
288 290anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
113 115parallel
Strand 3
A
85 88parallel
Strand 4
A
319 325anti-parallel
Strand 5
A
328 334anti-parallel
Strand 6
B
155 159parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 235first strand
Strand 2
A
258 260parallel
Strand 3
A
248 250anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
315 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il