Analysis of interatomic Contacts of Structural Units in PDB entry:
6UV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UV2 entry

There are 2 chains in PDB entry 6UV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 43VAL 473
C
 C 2 G 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 6UV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 64Right-handed alpha
Helix 2
AA2
A
66 78Right-handed alpha
Helix 3
AA3
A
93 97Right-handed 310
Helix 4
AA4
A
100 110Right-handed alpha
Helix 5
AA5
A
116 128Right-handed alpha
Helix 6
AA6
A
141 156Right-handed alpha
Helix 7
AA7
A
174 190Right-handed alpha
Helix 8
AA8
A
204 215Right-handed alpha
Helix 9
AA9
A
222 232Right-handed alpha
Helix 10
AB1
A
247 252Right-handed alpha
Helix 11
AB2
A
256 265Right-handed alpha
Helix 12
AB3
A
281 289Right-handed alpha
Helix 13
AB4
A
290 292Right-handed 310
Helix 14
AB5
A
319 321Right-handed 310
Helix 15
AB6
A
322 335Right-handed alpha
Helix 16
AB7
A
348 362Right-handed alpha
Helix 17
AB8
A
374 388Right-handed alpha
Helix 18
AB9
A
397 400Right-handed 310
Helix 19
AC1
A
419 428Right-handed alpha
Helix 20
AC2
A
444 449Right-handed 310
Helix 21
AC3
A
450 461Right-handed alpha
Helix 22
AC4
A
466 473Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6UV2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
296 300anti-parallel
Strand 3
A
132 135parallel
Strand 4
A
272 277parallel
Strand 5
A
242 245parallel
Strand 6
A
168 171parallel
Strand 7
A
218 221parallel
Strand 8
A
196 199parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 317first strand
Strand 2
A
437 443parallel
Strand 3
A
410 413parallel
Strand 4
A
342 345parallel
Strand 5
A
392 395parallel
Strand 6
A
366 369parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il