Analysis of interatomic Contacts of Structural Units in PDB entry:
6UVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6UVQ entry

There are 2 chains in PDB entry 6UVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12SER 268
B
 SER 12SER 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6UVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
29 33Right-handed 310
Helix 3
AA3
A
36 51Right-handed alpha
Helix 4
AA4
A
68 79Right-handed alpha
Helix 5
AA5
A
88 102Right-handed alpha
Helix 6
AA6
A
133 137Right-handed 310
Helix 7
AA7
A
139 150Right-handed alpha
Helix 8
AA8
A
169 171Right-handed 310
Helix 9
AA9
A
172 184Right-handed alpha
Helix 10
AB1
A
190 201Right-handed alpha
Helix 11
AB2
A
211 216Right-handed alpha
Helix 12
AB3
A
216 229Right-handed alpha
Helix 13
AB4
A
229 238Right-handed alpha
Helix 14
AB5
A
238 255Right-handed alpha
Helix 15
AB6
B
12 16Right-handed 310
Helix 16
AB7
B
29 33Right-handed 310
Helix 17
AB8
B
36 51Right-handed alpha
Helix 18
AB9
B
68 79Right-handed alpha
Helix 19
AC1
B
88 102Right-handed alpha
Helix 20
AC2
B
133 137Right-handed 310
Helix 21
AC3
B
139 150Right-handed alpha
Helix 22
AC4
B
169 171Right-handed 310
Helix 23
AC5
B
172 184Right-handed alpha
Helix 24
AC6
B
190 201Right-handed alpha
Helix 25
AC7
B
211 229Right-handed alpha
Helix 26
AC8
B
229 238Right-handed alpha
Helix 27
AC9
B
238 255Right-handed alpha
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There are 2 sheets in PDB entry 6UVQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
81 86parallel
Strand 3
A
59 63parallel
Strand 4
A
125 131parallel
Strand 5
A
151 164parallel
Strand 6
A
258 267anti-parallel
Strand 7
A
203 210anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 112first strand
Strand 2
B
81 86parallel
Strand 3
B
59 63parallel
Strand 4
B
125 131parallel
Strand 5
B
151 164parallel
Strand 6
B
258 267anti-parallel
Strand 7
B
203 210anti-parallel
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